Parsing JSON objects into a java.util.List using Scala - java

I'm trying to take the JSON output of an analysis tool, and turn it into a Java list.
I'm doing this with Scala, and while it doesn't sound that hard, I've run into trouble.
So I was hoping the following code would do it:
def returnWarnings(json: JSONObject): java.util.List[String] ={
var bugs = new ArrayBuffer[String]
for (warning <- json.getJSONArray("warnings").){ //might need to add .asScala
bugs += (warning.getString("warning_type") + ": " + warning.getString("message"))
}
val rval: java.util.List[String] = bugs.asJava
rval
}
This block produces two errors when I try to compile it:
Error:(18, 42) value foreach is not a member of org.json.JSONArray
for (warning <- json.getJSONArray("warnings")){ //might need to add .asScala
^
and
Error:(21, 49) value asJava is not a member of scala.collection.mutable.ArrayBuffer[String]
val rval: java.util.List[String] = bugs.asJava
^
I don't know what's wrong with my for loop.
EDIT: with a bit more reading, I figured out what was up with the loop. see https://stackoverflow.com/a/6376083/5843840
The second error is especially baffling, because as far as I can tell it should work. It is really similar to the code from this documentation
scala> val jul: java.util.List[Int] = ArrayBuffer(1, 2, 3).asJava
jul: java.util.List[Int] = [1, 2, 3]

You should try the following:
import scala.collection.JavaConverters._
def returnWarnings(input: JSONObject): java.util.List[String] = {
val warningsArray = input.getJSONArray("warnings")
val output = (0 until warningsArray.length).map { i =>
val warning = warningsArray.getJSONObject(i)
warning.getString("warning_type") + ": " + warning.getString("message")
}
output.asJava
}
That final conversion could be done implicitly (without invoking .asJava), by importing scala.collection.JavaConversions._

Related

Cannot resolve symbol union

I am using below function to list the directories. It works in Azure databricks but when I am adding in IntelliJ project code, it is not able to resolve "union" keyword. Do I need import anything here?
def listLeafDirectories(path: String): Array[String] =
dbutils.fs.ls(path).map(file => {
// Work around double encoding bug
val path = file.path.replace("%25", "%").replace("%25", "%")
if (file.isDir) listLeafDirectories(path)
else Array[String](path.substring(0,path.lastIndexOf("/")+1))
}).reduceOption(_ union _).getOrElse(Array()).distinct
ADB Notebook successful execution:
Sorry, my mistake.
In the screenshot provided highlighting error, I have recurse flag which I was not passing to the function (in same function).
So below one worked:
def listDirectories(dir: String, recurse: Boolean): Array[String] = {
dbutils.fs.ls(dir).map(file => {
val path = file.path.replace("%25", "%").replace("%25", "%")
if (file.isDir) listDirectories(path,recurse)
else Array[String](path.substring(0, path.lastIndexOf("/")+1))
}).reduceOption(_ union _).getOrElse(Array()).distinct
}

Parsing ASCII communication with Hardware using Java/Scala?

I am writing software that will interface external device via exchange of ASCII commands. Example:
POS? 1 2
=>1=-1158.4405
=>2=+0000.0000
where above we ask for position of motorised microscope stage for the 1-st and 2-nd axes. It responds with positions in um. More details and examples.
My Question: is there a library that would ease parsing such string outputs, and/or would help generate queries?
Otherwise, what are the best practises for parsing and communicating with hardware using Java/Scala?
Trying to cope with following syntax (see 12.1 Format):
Reply syntax:
[<argument>[{SP<argument>}]"="]<value>LF
Multi-line reply syntax:
{[<argument>[{SP<argument>}]"="]<value>SP LF}
[<argument>[{SP<argument>}]"="]<value>LF for the last line!
This is my code:
import scala.util.parsing.combinator._
case class Result(argument: String, value: Float)
class ReplyParser extends RegexParsers{
override def skipWhitespace = false
private def floatingPointNumber: Parser[String] =
"""(-|\+)?(\d+(\.\d*)?|\d*\.\d+)""".r
private def value: Parser[Float] = floatingPointNumber ^^ (_.toFloat)
private def argument: Parser[String] = "[^= \n]+".r
private def arguments: Parser[List[String]] = rep1sep(argument," ") <~ "="
private def result: Parser[List[Result]] = arguments.? ~ value ^^ {
case arguments ~ value =>
arguments.getOrElse(List("")).map {
Result(_,value)
}
}
def reply: Parser[List[Result]] = rep1sep(result, " \n".r) <~ " " ^^ {
case result => result.flatten
}
}
object Parsing extends ReplyParser {
def main(args: Array[String]) {
val result = parseAll(reply,"a=+000.123 \nc d=-999.567 \n789 ")
println(s"$result")
}
}

JSON4s can't find constructor w/spark

I've run into an issue with attempting to parse json in my spark job. I'm using spark 1.1.0, json4s, and the Cassandra Spark Connector, with DSE 4.6. The exception thrown is:
org.json4s.package$MappingException: Can't find constructor for BrowserData org.json4s.reflect.ScalaSigReader$.readConstructor(ScalaSigReader.scala:27)
org.json4s.reflect.Reflector$ClassDescriptorBuilder.ctorParamType(Reflector.scala:108)
org.json4s.reflect.Reflector$ClassDescriptorBuilder$$anonfun$6.apply(Reflector.scala:98)
org.json4s.reflect.Reflector$ClassDescriptorBuilder$$anonfun$6.apply(Reflector.scala:95)
scala.collection.TraversableLike$$anonfun$map$1.apply(TraversableLike.scala:244)
My code looks like this:
case class BrowserData(navigatorObjectData: Option[NavigatorObjectData],
flash_version: Option[FlashVersion],
viewport: Option[Viewport],
performanceData: Option[PerformanceData])
.... other case classes
def parseJson(b: Option[String]): Option[String] = {
implicit val formats = DefaultFormats
for {
browserDataStr <- b
browserData = parse(browserDataStr).extract[BrowserData]
navObject <- browserData.navigatorObjectData
userAgent <- navObject.userAgent
} yield (userAgent)
}
def getJavascriptUa(rows: Iterable[com.datastax.spark.connector.CassandraRow]): Option[String] = {
implicit val formats = DefaultFormats
rows.collectFirst { case r if r.getStringOption("browser_data").isDefined =>
parseJson(r.getStringOption("browser_data"))
}.flatten
}
def getRequestUa(rows: Iterable[com.datastax.spark.connector.CassandraRow]): Option[String] = {
rows.collectFirst { case r if r.getStringOption("ua").isDefined =>
r.getStringOption("ua")
}.flatten
}
def checkUa(rows: Iterable[com.datastax.spark.connector.CassandraRow], sessionId: String): Option[Boolean] = {
for {
jsUa <- getJavascriptUa(rows)
reqUa <- getRequestUa(rows)
} yield (jsUa == reqUa)
}
def run(name: String) = {
val rdd = sc.cassandraTable("beehive", name).groupBy(r => r.getString("session_id"))
val counts = rdd.map(r => (checkUa(r._2, r._1)))
counts
}
I use :load to load the file into the REPL, and then call the run function. The failure is happening in the parseJson function, as far as I can tell. I've tried a variety of things to try to get this to work. From similar posts, I've made sure my case classes are in the top level in the file. I've tried compiling just the case class definitions into a jar, and including the jar in like this: /usr/bin/dse spark --jars case_classes.jar
I've tried adding them to the conf like this: sc.getConf.setJars(Seq("/home/ubuntu/case_classes.jar"))
And still the same error. Should I compile all of my code into a jar? Is this a spark issue or a JSON4s issue? Any help at all appreciated.

how to save a list of case classes in scala

I have a case class named Rdv:
case class Rdv(
id: Option[Int],
nom: String,
prénom: String,
sexe: Int,
telPortable: String,
telBureau: String,
telPrivé: String,
siteRDV: String,
typeRDV: String,
libelléRDV: String,
numRDV: String,
étape: String,
dateRDV: Long,
heureRDVString: String,
statut: String,
orderId: String)
and I would like to save a list of such elements on disk, and reload them later.
I tried with java classes (ObjectOutputStream, fileOutputStream, objectInputStream, fileInputStream) but I have an error in the retrieving step : the statement
val n2 = ois.readObject().asInstanceOf[List[Rdv]]
always get an error(classNotFound:Rdv), although the correct path is given in the imports place.
Do you know a workaround to save such an object?
Please provide a little piece of code!
thanks
olivier
ps: I have the same error while using the Marshall class, such as in this code:
object Application extends Controller {
def index = Action {
//implicit val Rdv2Writes = Json.writes[rdv2]
def rdvTordv2(rdv: Rdv): rdv2 = new rdv2(
rdv.nom,
rdv.prénom,
rdv.dateRDV,
rdv.heureRDVString,
rdv.telPortable,
rdv.telBureau,
rdv.telPrivé,
rdv.siteRDV,
rdv.typeRDV,
rdv.libelléRDV,
rdv.orderId,
rdv.statut)
val n = variables.manager.liste_locale
val out = new FileOutputStream("out")
out.write(Marshal.dump(n))
out.close
val in = new FileInputStream("out")
val bytes = Stream.continually(in.read).takeWhile(-1 !=).map(_.toByte).toArray
val bar: List[Rdv] = Marshal.load[List[Rdv]](bytes) <--------------
val n3 = bar.map(rdv =>
rdvTordv2(rdv))
println("n3:" + n3.size)
Ok(views.html.Application.olivier2(n3))
}
},
in the line with the arrow.
It seems that the conversion to the type List[Rdv] encounters problems, but why? Is it a play! linked problem?
ok, there's a problem with play:
I created a new scala project with this code:
object Test1 extends App {
//pour des fins de test
case class Person(name:String,age:Int)
val liste_locale=List(new Person("paul",18))
val n = liste_locale
val out = new FileOutputStream("out")
out.write(Marshal.dump(n))
out.close
val in = new FileInputStream("out")
val bytes = Stream.continually(in.read).takeWhile(-1 !=).map(_.toByte).toArray
val bar: List[Person] = Marshal.load[List[Person]](bytes)
println(s"bar:size=${bar.size}")
}
and the display is good ("bar:size=1").
then, I modified my previous code in the play project, in the controller class, such as this:
object Application extends Controller {
def index = Action {
//pour des fins de test
case class Person(name:String,age:Int)
val liste_locale=List(new Person("paul",18))
val n = liste_locale
val out = new FileOutputStream("out")
out.write(Marshal.dump(n))
out.close
val in = new FileInputStream("out")
val bytes = Stream.continually(in.read).takeWhile(-1 !=).map(_.toByte).toArray
val bar: List[Person] = Marshal.load[List[Person]](bytes)
println(s"bar:size=${bar.size}")
Ok(views.html.Application.olivier2(Nil))
}
}
and I have an error saying:
play.api.Application$$anon$1: Execution exception[[ClassNotFoundException: controllers.Application$$anonfun$index$1$Person$3]]
is there anyone having the answer?
edit: I thought the error could come from sbt, so I modified build.scala such as this:
import sbt._
import Keys._
import play.Project._
object ApplicationBuild extends Build {
val appName = "sms_play_2"
val appVersion = "1.0-SNAPSHOT"
val appDependencies = Seq(
// Add your project dependencies here,
jdbc,
anorm,
"com.typesafe.slick" % "slick_2.10" % "2.0.0",
"com.github.nscala-time" %% "nscala-time" % "0.6.0",
"org.xerial" % "sqlite-jdbc" % "3.7.2",
"org.quartz-scheduler" % "quartz" % "2.2.1",
"com.esotericsoftware.kryo" % "kryo" % "2.22",
"io.argonaut" %% "argonaut" % "6.0.2")
val mySettings = Seq(
(javaOptions in run) ++= Seq("-Dconfig.file=conf/dev.conf"))
val playCommonSettings = Seq(
Keys.fork := true)
val main = play.Project(appName, appVersion, appDependencies).settings(
Keys.fork in run := true,
resolvers += Resolver.sonatypeRepo("snapshots")).settings(mySettings: _*)
.settings(playCommonSettings: _*)
}
but without success, the error is still there (Class Person not found)
can you help me?
Scala Pickling has reasonable momentum and the approach has many advantages (lots of the heavy lifting is done at compile time). There is a plugable serialization mechanism and formats like json are supported.

How to link classes from JDK into scaladoc-generated doc?

I'm trying to link classes from the JDK into the scaladoc-generated doc.
I've used the -doc-external-doc option of scaladoc 2.10.1 but without success.
I'm using -doc-external-doc:/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/rt.jar#http://docs.oracle.com/javase/7/docs/api/, but I get links such as index.html#java.io.File instead of index.html?java/io/File.html.
Seems like this option only works for scaladoc-generated doc.
Did I miss an option in scaladoc or should I fill a feature request?
I've configured sbt as follows:
scalacOptions in (Compile,doc) += "-doc-external-doc:/usr/lib/jvm/java-7-openjdk-amd64/jre/lib/rt.jar#http://docs.oracle.com/javase/7/docs/api"
Note: I've seen the Opts.doc.externalAPI util in the upcoming sbt 0.13. I think a nice addition (not sure if it's possible) would be to pass a ModuleID instead of a File. The util would figure out which file corresponds to the ModuleID.
I use sbt 0.13.5.
There's no out-of-the-box way to have the feature of having Javadoc links inside scaladoc. And as my understanding goes, it's not sbt's fault, but the way scaladoc works. As Josh pointed out in his comment You should report to scaladoc.
There's however a workaround I came up with - postprocess the doc-generated scaladoc so the Java URLs get replaced to form proper Javadoc links.
The file scaladoc.sbt should be placed inside a sbt project and whenever doc task gets executed, the postprocessing via fixJavaLinksTask task kicks in.
NOTE There are lots of hardcoded paths so use it with caution (aka do the polishing however you see fit).
import scala.util.matching.Regex.Match
autoAPIMappings := true
// builds -doc-external-doc
apiMappings += (
file("/Library/Java/JavaVirtualMachines/jdk1.8.0_11.jdk/Contents/Home/jre/lib/rt.jar") ->
url("http://docs.oracle.com/javase/8/docs/api")
)
lazy val fixJavaLinksTask = taskKey[Unit](
"Fix Java links - replace #java.io.File with ?java/io/File.html"
)
fixJavaLinksTask := {
println("Fixing Java links")
val t = (target in (Compile, doc)).value
(t ** "*.html").get.filter(hasJavadocApiLink).foreach { f =>
println("fixing " + f)
val newContent = javadocApiLink.replaceAllIn(IO.read(f), fixJavaLinks)
IO.write(f, newContent)
}
}
val fixJavaLinks: Match => String = m =>
m.group(1) + "?" + m.group(2).replace(".", "/") + ".html"
val javadocApiLink = """\"(http://docs\.oracle\.com/javase/8/docs/api/index\.html)#([^"]*)\"""".r
def hasJavadocApiLink(f: File): Boolean = (javadocApiLink findFirstIn IO.read(f)).nonEmpty
fixJavaLinksTask <<= fixJavaLinksTask triggeredBy (doc in Compile)
I took the answer by #jacek-laskowski and modified it so that it avoid hard-coded strings and could be used for any number of Java libraries, not just the standard one.
Edit: the location of rt.jar is now determined from the runtime using sun.boot.class.path and does not have to be hard coded.
The only thing you need to modify is the map, which I have called externalJavadocMap in the following:
import scala.util.matching.Regex
import scala.util.matching.Regex.Match
val externalJavadocMap = Map(
"owlapi" -> "http://owlcs.github.io/owlapi/apidocs_4_0_2/index.html"
)
/*
* The rt.jar file is located in the path stored in the sun.boot.class.path system property.
* See the Oracle documentation at http://docs.oracle.com/javase/6/docs/technotes/tools/findingclasses.html.
*/
val rtJar: String = System.getProperty("sun.boot.class.path").split(java.io.File.pathSeparator).collectFirst {
case str: String if str.endsWith(java.io.File.separator + "rt.jar") => str
}.get // fail hard if not found
val javaApiUrl: String = "http://docs.oracle.com/javase/8/docs/api/index.html"
val allExternalJavadocLinks: Seq[String] = javaApiUrl +: externalJavadocMap.values.toSeq
def javadocLinkRegex(javadocURL: String): Regex = ("""\"(\Q""" + javadocURL + """\E)#([^"]*)\"""").r
def hasJavadocLink(f: File): Boolean = allExternalJavadocLinks exists {
javadocURL: String =>
(javadocLinkRegex(javadocURL) findFirstIn IO.read(f)).nonEmpty
}
val fixJavaLinks: Match => String = m =>
m.group(1) + "?" + m.group(2).replace(".", "/") + ".html"
/* You can print the classpath with `show compile:fullClasspath` in the SBT REPL.
* From that list you can find the name of the jar for the managed dependency.
*/
lazy val documentationSettings = Seq(
apiMappings ++= {
// Lookup the path to jar from the classpath
val classpath = (fullClasspath in Compile).value
def findJar(nameBeginsWith: String): File = {
classpath.find { attributed: Attributed[File] => (attributed.data ** s"$nameBeginsWith*.jar").get.nonEmpty }.get.data // fail hard if not found
}
// Define external documentation paths
(externalJavadocMap map {
case (name, javadocURL) => findJar(name) -> url(javadocURL)
}) + (file(rtJar) -> url(javaApiUrl))
},
// Override the task to fix the links to JavaDoc
doc in Compile <<= (doc in Compile) map {
target: File =>
(target ** "*.html").get.filter(hasJavadocLink).foreach { f =>
//println(s"Fixing $f.")
val newContent: String = allExternalJavadocLinks.foldLeft(IO.read(f)) {
case (oldContent: String, javadocURL: String) =>
javadocLinkRegex(javadocURL).replaceAllIn(oldContent, fixJavaLinks)
}
IO.write(f, newContent)
}
target
}
)
I am using SBT 0.13.8.

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