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Why does Selenium work for me in IntelliJ but fail when I run my jar in the command line?

I set up Selenium version 4.7.1 in my project in IntelliJ using maven. In order to get past the error reported here, I added an explicit dependency for guava version 31.1 (which is what is included in the lib folder of the downloadable package on the Selenium website for that version) and I added an exclusion on the selenium dependency for guava.
Now the application works fine when I run it in IntelliJ, but I'm getting this error when I run the jar in my terminal:
Exception in thread "main" java.lang.NoClassDefFoundError: org/openqa/selenium/WebDriver
...
Caused by: java.lang.ClassNotFoundException: org.openqa.selenium.WebDriver
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:641)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:188)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:520)
Other similar questions I've found, like this one, all focus on the guava issue, but it seems like at this point my problem must have something to do with my build configuration in IntelliJ and the jar that is getting created.
I did find some discussions that seemed more pertinent to my issue, but they were geared towards people manually adding the jars, and the advice given was usually to switch to use maven or gradle, but I'm already using maven. I have gone to Project Settings > Libraries and removed any external jars so that all dependencies should be getting pulled in by Maven.
Another discussion I found suggested using the maven-shaded-plugin, which I added and did mvn clean install, but still no luck.
How can I make sure the jar created by IntelliJ runs exactly the same as it runs in IntelliJ? Any help is appreciated.
Here is my current pom.xml, which includes a suggestion from the current answer, but at this point I'm still experiencing the same issue:
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>groupId</groupId>
<artifactId>stock-analysis</artifactId>
<version>1.0-SNAPSHOT</version>
<dependencies>
<dependency>
<groupId>com.github.sh0nk</groupId>
<artifactId>matplotlib4j</artifactId>
<version>0.5.0</version>
<exclusions>
<exclusion>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-web</artifactId>
<version>5.3.6</version>
</dependency>
<dependency>
<groupId>org.springframework.cloud</groupId>
<artifactId>spring-cloud-openfeign-core</artifactId>
<version>3.0.2</version>
</dependency>
<dependency>
<groupId>org.codehaus.jackson</groupId>
<artifactId>jackson-mapper-asl</artifactId>
<version>1.9.13</version>
</dependency>
<dependency>
<groupId>org.apache.httpcomponents</groupId>
<artifactId>httpclient</artifactId>
<version>4.5.13</version>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-api</artifactId>
<version>5.4.2</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-engine</artifactId>
<version>5.4.2</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.assertj</groupId>
<artifactId>assertj-core</artifactId>
<version>3.8.0</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.projectlombok</groupId>
<artifactId>lombok</artifactId>
<version>RELEASE</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
<version>31.1-jre</version>
</dependency>
<dependency>
<groupId>org.seleniumhq.selenium</groupId>
<artifactId>selenium-java</artifactId>
<version>4.7.2</version>
<exclusions>
<exclusion>
<groupId>com.google.guava</groupId>
<artifactId>guava</artifactId>
</exclusion>
</exclusions>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.6</version>
<configuration>
<archive>
<manifest>
<addClasspath>true</addClasspath>
<classpathPrefix>lib/</classpathPrefix>
<addDefaultImplementationEntries>false</addDefaultImplementationEntries>
<packageName>main.java.termaat.stocks.strategy.processing</packageName>
<mainClass>StockReportWriter</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>copy-dependencies</goal>
</goals>
<configuration>
<outputDirectory>${project.build.directory}/lib</outputDirectory>
<includeScope>compile</includeScope>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
<properties>
<maven.compiler.source>11</maven.compiler.source>
<maven.compiler.target>11</maven.compiler.target>
</properties>
Here is a screenshot of my project structure after the updates to my pom. Currently the stock-analysis-1.0-SNAPSHOT.jar that is built is much to small, so I'm trying to figure out if something is configured wrong with the maven-jar-plugin.

Probably you aren't building dependencies correctly. U need both:
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.6</version>
<configuration>
<archive>
<manifest>
<addClasspath>true</addClasspath>
<classpathPrefix>lib/</classpathPrefix>
<addDefaultImplementationEntries>false</addDefaultImplementationEntries>
<packageName>your package</packageName>
<mainClass>your class</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>copy-dependencies</goal>
</goals>
<configuration>
<outputDirectory>${project.build.directory}/lib</outputDirectory>
<includeScope>compile</includeScope>
</configuration>
</execution>
</executions>
</plugin>
It's hard to help if you don't post your pom.xml though

SAM build fails because Maven install fails with "The packaging for this project did not assign a file to the build artifact"

I have an issue where I am trying to get mvn install to work so that my sam build works with local invocation using Docker, but it keeps failing due to the following error:
[ERROR] Failed to execute goal org.apache.maven.plugins:maven-install-plugin:2.4:install (default-install) on project my-project: The packaging for this project did not assign a file to the build artifact -> [Help 1]
There are many different iterations of problems and solutions regarding "The packaging for this project did not assign a file to the build artifact" on StackOverflow, but none of them seem to resolve my issue.
For example, I can do a mvn jar:jar install:install and that works correctly, but I can't specify goals like that in the SAM build, so that isn't a proper solution -- I need mvn install to work. I have tried many variations of deleting the .m2 folder, which does nothing. I can also change the version of the maven-install-plugin to no avail. I can specify the file in the maven-install-plugin and if the path is correct, it doesn't see it, but if it is incorrect, it says it doesn't exist.
Nothing seems to solve the issue, so I need to find a real solution.
Here is my pom.xml:
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>my.groupId</groupId>
<artifactId>my-artifact</artifactId>
<version>1.0-SNAPSHOT</version>
<packaging>jar</packaging>
<properties>
<maven.compiler.source>1.8</maven.compiler.source>
<maven.compiler.target>1.8</maven.compiler.target>
<jersey.version>2.30.1</jersey.version>
<jackson.version>2.10.2</jackson.version>
</properties>
<dependencies>
<dependency>
<groupId>com.amazonaws.serverless</groupId>
<artifactId>aws-serverless-java-container-jersey</artifactId>
<version>1.4</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-json-jackson</artifactId>
<version>${jersey.version}</version>
<exclusions>
<exclusion>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
</exclusion>
<exclusion>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
</exclusion>
<exclusion>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>${jackson.version}</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.inject</groupId>
<artifactId>jersey-hk2</artifactId>
<version>${jersey.version}</version>
<!-- excluding redundant javax.inject dependency -->
<exclusions>
<exclusion>
<groupId>javax.inject</groupId>
<artifactId>javax.inject</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-java-sdk-dynamodb</artifactId>
<version>1.11.925</version>
</dependency>
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-lambda-java-core</artifactId>
<version>1.2.1</version>
</dependency>
<!--START LOGGING DEPENDENCIES-->
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-lambda-java-log4j2</artifactId>
<version>1.2.0</version>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-api</artifactId>
<version>2.13.0</version>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-core</artifactId>
<version>2.13.2</version>
</dependency>
<dependency>
<groupId>org.apache.logging.log4j</groupId>
<artifactId>log4j-slf4j18-impl</artifactId>
<version>2.13.3</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>2.0.0-alpha1</version>
</dependency>
<!--END LOGGING DEPENDENCIES-->
<dependency>
<groupId>com.google.code.gson</groupId>
<artifactId>gson</artifactId>
<version>2.8.6</version>
</dependency>
<dependency>
<groupId>org.postgresql</groupId>
<artifactId>postgresql</artifactId>
<version>42.2.18</version>
</dependency>
<dependency>
<groupId>com.amazonaws</groupId>
<artifactId>aws-java-sdk-cloudfront</artifactId>
<version>1.11.927</version>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12</version>
<scope>test</scope>
</dependency>
</dependencies>
<profiles>
<profile>
<id>shaded-jar</id>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<version>3.2.2</version>
<configuration>
<createDependencyReducedPom>false</createDependencyReducedPom>
</configuration>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
<configuration>
<transformers>
<transformer implementation="com.github.edwgiz.maven_shade_plugin.log4j2_cache_transformer.PluginsCacheFileTransformer" />
</transformers>
</configuration>
</execution>
</executions>
<dependencies>
<dependency>
<groupId>com.github.edwgiz</groupId>
<artifactId>maven-shade-plugin.log4j2-cachefile-transformer</artifactId>
<version>2.13.0</version>
</dependency>
</dependencies>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>assembly-zip</id>
<activation>
<activeByDefault>true</activeByDefault>
</activation>
<build>
<plugins>
<!-- don't build a jar, we'll use the classes dir -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>3.2.0</version>
<executions>
<execution>
<id>default-jar</id>
<phase>none</phase>
</execution>
</executions>
</plugin>
<!-- select and copy only runtime dependencies to a temporary lib folder -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-dependency-plugin</artifactId>
<version>3.1.1</version>
<executions>
<execution>
<id>copy-dependencies</id>
<phase>package</phase>
<goals>
<goal>copy-dependencies</goal>
</goals>
<configuration>
<outputDirectory>${project.build.directory}${file.separator}lib</outputDirectory>
<includeScope>runtime</includeScope>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>3.1.1</version>
<executions>
<execution>
<id>zip-assembly</id>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
<configuration>
<finalName>${project.artifactId}-${project.version}</finalName>
<descriptors>
<descriptor>src${file.separator}assembly${file.separator}bin.xml</descriptor>
</descriptors>
<attach>false</attach>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>
</profiles>
</project>
And here is my bin.xml:
<assembly xmlns="http://maven.apache.org/ASSEMBLY/2.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/ASSEMBLY/2.0.0 http://maven.apache.org/xsd/assembly-2.0.0.xsd">
<id>lambda-package</id>
<formats>
<format>zip</format>
</formats>
<includeBaseDirectory>false</includeBaseDirectory>
<fileSets>
<!-- copy runtime dependencies with some exclusions -->
<fileSet>
<directory>${project.build.directory}${file.separator}lib</directory>
<outputDirectory>lib</outputDirectory>
</fileSet>
<!-- copy all classes -->
<fileSet>
<directory>${project.build.directory}${file.separator}classes</directory>
<includes>
<include>**</include>
</includes>
<outputDirectory>${file.separator}</outputDirectory>
</fileSet>
</fileSets>
</assembly>

After much searching and many trial and errors, I finally figured out how to resolve this and figured I would share for those that are suffering through this like I was. There are two methods:
You can remove the following plugin:
<!-- don't build a jar, we'll use the classes dir -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>3.2.0</version>
<executions>
<execution>
<id>default-jar</id>
<phase>none</phase>
</execution>
</executions>
</plugin>
While this makes it function correctly, it also produces a jar file, which may not be desirable, especially in the case of a Lambda (unnecessarily increases its size).
(Preferred solution) Add the maven-install-plugin with a skip configuration:
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-install-plugin</artifactId>
<version>3.0.0-M1</version>
<configuration>
<skip>true</skip>
</configuration>
</plugin>
This solution both solves the problem and prevents you needing to create a jar file. This allowed my SAM build to work as a result of Maven functioning correctly.

How to fix "NoClassDefFoundError KieServices.Factory"

I am just starting learning JBoss Drools. So I have made a little application out from a book, Drools Jboss Rules 5.X. As I noticed soon, the initialisation of Drools 5.X is depricated and I rewrote the Code to Drools 6.2+ using the KieServices. Building the project finished without error.But running the jar I always got the NoClassDefFoundError: org/kie/api/KieServices$Factory. Then I began at the very beginning with a code, where nothing is in, just initialising the KieServices and got the same error. All suggestions of Stackoverflow and other discussion did not help. See below the code (nearly nothing) and the maven-file. Does anyone have a solution?
Main Class with initialisation of KieServices
import org.kie.api.KieServices;
public class App {
public static void main(String[] args) {
System.out.println("start");
KieServices ks = KieServices.Factory.get();
}
}
And here is my Maven-project
<properties>
<drools.version>6.3.0.Final</drools.version>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.drools</groupId>
<artifactId>drools-core</artifactId>
<version>${drools.version}</version>
</dependency>
<dependency>
<groupId>org.drools</groupId>
<artifactId>drools-compiler</artifactId>
<version>${drools.version}</version>
</dependency>
<dependency>
<groupId>org.kie</groupId>
<artifactId>kie-api</artifactId>
<version>${drools.version}</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.kie.server/kie-server-api -->
<dependency>
<groupId>org.kie.server</groupId>
<artifactId>kie-server-api</artifactId>
<version>${drools.version}</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.kie</groupId>
<artifactId>kie-maven-plugin</artifactId>
<version>${drools.version}</version>
<extensions>true</extensions>
</plugin>
<plugin>
<!-- Build an executable JAR -->
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>3.1.1</version>
<configuration>
<archive>
<manifest>
<mainClass>App</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
</plugins>
</build>

Finally I added a Maven Shade Plugin to create an Uber jar. I guarantees, that all classes are there at runtime. It works. Maybe, there is a better solution, then please leave an answer. The maven project looks now like this:
<properties>
<drools.version>6.3.0.Final</drools.version>
<java.version>1.8</java.version>
</properties>
<dependencies>
<dependency>
<groupId>org.drools</groupId>
<artifactId>drools-core</artifactId>
<version>${drools.version}</version>
</dependency>
<dependency>
Maybe it helps some others.
<groupId>org.drools</groupId>
<artifactId>drools-compiler</artifactId>
<version>${drools.version}</version>
</dependency>
<dependency>
<groupId>org.kie</groupId>
<artifactId>kie-api</artifactId>
<version>${drools.version}</version>
</dependency>
<dependency>
<groupId>commons-lang</groupId>
<artifactId>commons-lang</artifactId>
<version>2.6</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.7.21</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-simple</artifactId>
<version>1.7.21</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.kie</groupId>
<artifactId>kie-maven-plugin</artifactId>
<version>${drools.version}</version>
<extensions>true</extensions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-shade-plugin</artifactId>
<version>1.6</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>shade</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<!-- Build an executable JAR -->
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>3.1.1</version>
<configuration>
<archive>
<manifest>
<mainClass>App</mainClass>
<addClasspath>true</addClasspath>
</manifest>
</archive>
</configuration>
</plugin>
</plugins>
</build>

Why I am getting NoClassDefFoundError even after I have included right dependencies in POM?

I am trying to build my application and ship the jar file to users. It is bulding fine, but it is giving problem when I am trying to run the jar.
I am trying to run jar file compiled from mvn package command. After that, I am running java -jar ApplicationRunner.jar, but I am getting below exception. Note that when I am running through Intellij Idea IDE - it works fine
Exception in thread "main" java.lang.NoClassDefFoundError: com/fasterxml/jackson/core/JsonProcessingException
at cs550.pa3.ApplicationRunner.<init>(ApplicationRunner.java:27)
at cs550.pa3.ApplicationRunner.main(ApplicationRunner.java:39)
Caused by: java.lang.ClassNotFoundException: com.fasterxml.jackson.core.JsonProcessingException
at java.net.URLClassLoader.findClass(URLClassLoader.java:381)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:331)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
My pom.xml file -
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>FileSharingSystem</groupId>
<artifactId>FileSharingSystem-1</artifactId>
<version>3.1-SNAPSHOT</version>
<packaging>jar</packaging>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
<!-- Make this jar executable -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<archive>
<manifest>
<mainClass>cs550.pa3.ApplicationRunner</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.7.5</version>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.12</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.mockito/mockito-all -->
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>1.9.5</version>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-api</artifactId>
<version>RELEASE</version>
</dependency>
<!--<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>2.6.1</version>
</dependency>-->
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.core/jackson-core -->
<!--<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
<version>2.8.4</version>
</dependency>-->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.datatype</groupId>
<artifactId>jackson-datatype-jsr310</artifactId>
<version>2.6.5</version>
</dependency>
</dependencies>
</project>

If you want to provide an executable jar to the client you should add the required dependencies in the jar.
You could use the maven-assembly-plugin to create a jar including dependencies :
<build>
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
<configuration>
<archive>
<manifest>
<mainClass>cs550.pa3.ApplicationRunner</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
</plugin>
</plugins>
</build>

As #davidxxx mentioned, we need to build it with dependencies. For future reference it is below -
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>FileSharingSystem</groupId>
<artifactId>FileSharingSystem</artifactId>
<version>3.1-SNAPSHOT</version>
<packaging>jar</packaging>
<name>File Sharing System</name>
<url>http://maven.apache.org</url>
<properties>
<jdk.version>1.8</jdk.version>
<jodatime.version>2.5</jodatime.version>
<junit.version>4.12</junit.version>
</properties>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>1.9.5</version>
</dependency>
<dependency>
<groupId>joda-time</groupId>
<artifactId>joda-time</artifactId>
<version>${jodatime.version}</version>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
<version>2.8.0</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>com.fasterxml.jackson.datatype</groupId>
<artifactId>jackson-datatype-jsr310</artifactId>
<version>2.6.5</version>
</dependency>
<dependency>
<groupId>org.junit.jupiter</groupId>
<artifactId>junit-jupiter-api</artifactId>
<version>RELEASE</version>
</dependency>
</dependencies>
<build>
<finalName>FileSharingSystem</finalName>
<plugins>
<!-- download source code in Eclipse, best practice -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-eclipse-plugin</artifactId>
<version>2.9</version>
<configuration>
<downloadSources>true</downloadSources>
<downloadJavadocs>false</downloadJavadocs>
</configuration>
</plugin>
<!-- Set a compiler level -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<source>${jdk.version}</source>
<target>${jdk.version}</target>
</configuration>
</plugin>
<!-- Maven Assembly Plugin -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>2.4.1</version>
<configuration>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
<!-- MainClass in mainfest make a executable jar -->
<archive>
<manifest>
<mainClass>cs550.pa3.ApplicationRunner</mainClass>
</manifest>
</archive>
</configuration>
<executions>
<execution>
<id>make-assembly</id>
<phase>package</phase> <!-- bind to the packaging phase -->
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
</project>

java.lang.NoClassDefFoundError jar application

I got a maven project with Netbeans 8 (linux).
My project is a maven application that I have to 'export' as a JAR runnable JAVA application. While I'm developing the system in Netbeans everything works fine with maven dependencies, but after compile and generate the .jar file in the target folder I got the error NoClassDefFoundError. In my searches through google I found that this problem is caused when I have the dependencies in development environment but not when it's compiled with classpath.
One solution is to include dependencies jar as library in project, but with this I lost maven functionality. I don't wanna make it, just in last case.
How can I solve this problem without add dependencies as library inside project?
Thank you very much!

You do not use the correct maven plugin to generate a runnable JAR, meaning a jar with all dependencies within it.
Here is how it should look like
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>2.4</version>
<configuration>
<finalName>.....</finalName>
<outputDirectory>${basedir}</outputDirectory>
<archive>
<manifest>
<mainClass>......</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
What you have configured is the standard maven plugin to generate a jar file, but without the dependencies included.

What is generating error is the Hibernate and the POI.
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.4</version>
<configuration>
<archive>
<manifest>
<mainClass>com.print.Main</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
</plugins>
</build>
<repositories>
<repository>
<id>unknown-jars-temp-repo</id>
<name>"mvn deploy:deploy-file -Durl=file:///var/www/projetos/041print-proc/lib/ -Dfile=hibernate-core-4.3.10.Final.jar -DgroupId=org.hibernate -DartifactId=hibernate-core -Dpackaging=jar -Dversion=4.3.10.Final"</name>
<url>file:${project.basedir}/lib</url>
</repository>
</repositories>
<dependencies>
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>4.3.10.Final</version>
</dependency>
<dependency>
<groupId>org.postgresql</groupId>
<artifactId>postgresql</artifactId>
<version>9.4-1201-jdbc41</version>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi</artifactId>
<version>3.12</version>
</dependency>
<dependency>
<groupId>org.apache.xmlbeans</groupId>
<artifactId>xmlbeans</artifactId>
<version>2.6.0</version>
</dependency>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi-ooxml-schemas</artifactId>
<version>3.12</version>
</dependency>
<dependency>
<groupId>dom4j</groupId>
<artifactId>dom4j</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>commons-logging</groupId>
<artifactId>commons-logging</artifactId>
<version>1.1.3</version>
</dependency>
<dependency>
<groupId>commons-codec</groupId>
<artifactId>commons-codec</artifactId>
<version>1.9</version>
</dependency>
</dependencies>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<maven.compiler.source>1.7</maven.compiler.source>
<maven.compiler.target>1.7</maven.compiler.target>
</properties>
<name>041 Print Processadores</name>
<description>Processadores de Texto para Dados Variáveis</description>