I am getting into Clojure and Grammatical Evolution at the same time and discovered GEVA, which is a GE tool written in Java. I have no background in Java. So I don't have to re-invent the wheel, how can I integrate GEVA into Clojure?
I can execute the default script from the CLI with:
java -jar GEVA.jar -main_class Main.Run
The GEVA source directory has the following subdirectories with packages named after the directory:
Algorithm com Exceptions FitnessEvaluation Fractal Individuals Main Mapper Operator Parameter UI Util
The Main subdirectory has the following files and tutorial subdir:
AbstractRun.java Experiment.java Run.java State.java Tutorials
The following classes are in the Run.java file:
public class Run extends AbstractRun
public Run()
public void experiment(String[] args)
public void setup(String[] args)
private void setSeed()
public static void main(String[] args)
From what I can tell, the static method 'main' in class Main.Run is what I want to execute. However when I try to follow the Java interop instructions, I am getting errors.
clgeva.test=> (.Main.Run/main)
java.lang.Exception: No such namespace: .Main.Run (NO_SOURCE_FILE:5)
clgeva.test=> (.Main.Run/main "")
java.lang.Exception: No such namespace: .Main.Run (NO_SOURCE_FILE:6)
I'm obviously not importing the namespace correctly to run the main function.
user=> (import Main)
java.lang.ClassNotFoundException: Main (NO_SOURCE_FILE:1)
user=> (import Main.Run)
Main.Run
user=> (main)
java.lang.Exception: Unable to resolve symbol: main in this context (NO_SOURCE_FILE:3)
user=> (.Main.Run/main)
java.lang.Exception: No such namespace: .Main.Run (NO_SOURCE_FILE:4)
What the heck am I doing wrong? I am sure I'm just missing something obvious, but I've been banging my head on it for a little while and need some direction. Thanks.
First, make sure you are loading the GEVA lib correctly - see http://clojure.org/libs
I'm guessing, from the java.lang.ClassNotFoundException error, that GEVA is not on your classpath.
Then you want to look at the Clojure documentation for Java interop: http://clojure.org/java_interop
The syntax for calling a static method with no arguments (I'll use an example that everyone has access to) is:
=> (java.lang.System/currentTimeMillis)
1284574337322
The above form is preferred, but the following is also possible, and can be useful in macros:
=> (. java.lang.System currentTimeMillis)
1284574477369
In this case, "java.lang." may be omitted, but I'm including it to match your case more closely.
=> (System/currentTimeMillis)
1284574617771
Adding a dot to the first form will not work, whether with or without a space:
user=> (.System/currentTimeMillis)
java.lang.Exception: No such namespace: .System (NO_SOURCE_FILE:44)
user=> (. System/currentTimeMillis)
java.lang.IllegalArgumentException: Malformed member expression, expecting (. target member ...) (NO_SOURCE_FILE:45)
You have the right idea, but you do have some syntax errors.
clgeva.test=> (.Main.Run/main)
Should have a space between the dot operator and the Main.Run/main reference. As it is, it's trying to find something called ".Main.Run" which obviously doesn't exist. Do it like so:
clgeva.test=> (. Main.Run/main)
Assuming you have your classpath set up correctly, it should work.
Importing the class using (import ...) and calling (main) won't work because main is a static method.
Related
I wrote a Java program whose filename was (intentionally) different from the class I wrote inside the file. The javac command failed as expected on both CMD and WSL. The java command however worked and ran my print statement. I wrote the code intentionally this way so there is no way it was a previously compiled version of the code. The following code was written in a file called "explainJava.java" (notice the filename is different from the class name).
public class explain{
public static void main(String[] args) {
System.out.println("Java is weird");
}
}
I've had to google this myself, but I think I've found an explanation in this article.
According to that source as of Java 11 java is capable of compiling a single source file into memory.
What I conclude from that: When the file is compiled into memory and not written to disk it obviously cannot have a file name. If there is no filename there is no such thing as a wrong filename, therefore the code executes.
Please also note that the restriction of having to name a file like the public class within that file is more of a design decision to make work for the compiler easier/ faster. It is not a physical restriction so to speak. Have a look at the following thread for more details.
If you put this code:
public class explain {
public static void main(String[] args) {
System.out.println("Java is weird");
}
}
into a file named explainJava.java, and then compile it with this:
javac explainJava.java
you will get an error that correctly informs you that your filename ("explainJava") and the class defined inside that file ("explain") do not match:
explainJava.java:1: error: class explain is public, should be declared in a file named explain.java
public class explain{
^
1 error
If you run this command:
$ java explainJava.java
Java is weird
you see expected output, because you're skipping the explicit compilation step (that is, you aren't running javac first) and instead relying on behavior introduced in Java 11 that allows you to compile+run in a single step. Here's an explanation: Does the 'java' command compile Java programs?
So the answer is to either:
rename your file to match the class, so change the filename to "explain.java", or
rename the class to match the file, change public class explain to be public class explainJava
Trying to learn Java again and I cannot remember how I figured this out the first time around.
I have 3 classes; a GameLauncher, GuessGame, and Player. GameLauncher has my main method.
They are all packaged as chap02, I cannot remember if that is important to me yet.
I am compiling like this: javac GameLauncher.java GuessGame.java Player.java
running like this: java GameLauncher
I am getting this error: Could not find or load main class GameLauncher.
I know this is a ridiculous issue, but I have always had trouble with this kind of stuff. The actual programming and writing code I can pick up just fine, but dealing with these damn compilers always gets me. Any help would be appreciated. Thanks
package chap02;
public class GameLauncher {
public static void main (String[] args) {
GuessGame game = new GuessGame();
game.startGame();
}
}
Edit: The issue isn't with the actual code, the issue is with how I am compiling it.
When running the program, you have to run it form the correct directory. Remember, that you used packages, so you have the following package-structure
src
chap02
GameLauncher.java
GuessGame.java
Player.java
after compilation, you will find the corresponding .class-files in the chap02-folder. To start the game, you have run the following command from the src-directory:
java chap02.GameLauncher
Since you specified a package in the source code, you have to use the full qualified name, including the package, to which the class belongs.
EDIT as vefthym mentioned, you have to compile the code in the same way, running
javac chap02/GameLauncher.java
from the source-directory.
EDIT 2
"src" is the directory, where your src lies. I, for example, have my Code unter X:\JDK-Projects[Project-name]\src. You have to specify the full absolute path to the src-Directory or the relative path form the directory you are currently in.
My DrJava was working fine, but now I keep getting the folowing error whenever I run anything:
Static Error: This class does not have a static void main method accepting String[].
So it will compile OK, but then it shoots out the error . This happens even though everything I test does indeed have a public static void main(String[] args) in it. It seems like a classpath/resources type of error. I appreciate any tips
EDIT: my class
public class Test{
public static void main(String[] args){
System.out.println(" hashmap ");
}
}
There's nothing wrong with the code, so the problem must be with the environment.
Check that you're actually executing that class. Find out where the class that's executed is specified and check it's correct
Check that you're compiling the class. Maybe the code you're looking at has not been compiled and you're trying to execute an old version that was compild before you coded a main()
Check your classpath. Is the compiled class accessible in the classpath of the java command
You don't need to reinstall java, nor is it a java version issue. It may be the way that your are running the program.
To check if it is a problem with your code, do the following:
Make a new folder and put Test.java in it.
Open up Command Line Or Terminal and change to that folder .
Type javac Test.java. Test.class should be in the folder now.
If you want, open up the class with a text editor. This is what I get:
˛∫æ2
<init>()VCodeLineNumberTablemain([Ljava/lang/String;)V
SourceFile Test.java hashmap Testjava/lang/Objectjava/lang/SystemoutLjava/io/PrintStream;java/io/PrintStreamprintln(Ljava/l ang/String;)V! *∑±
% ≤∂±
Back to the command line or terminal, type java Test.
If you get an error, which you shouldn't, I don't know what to say. It should produce the string " hashmap " on to the command line or terminal.
Why re-installing Dr. Java may not work is because you may be using the same working directory, causing same run settings to be used. Dr. Java may be running an external program, one without a main method.
I think that you should install the Eclipse IDE for Java. It is much easier to get around, it looks nicer, and it runs the file or project that you are looking at currently.
Sometimes this problem happens because may be mistake in saving file.you always your file using double quotes and with the .java extension which is main class means that class containing main method.
you should save your file by class name which is public .if there is two classes and both have main method then you should save your file by class name that is public and that class will be run.As like your compiler looking for main method in public static void main(String [] args) that is contract for jvm to run a programme
so it is not able to found that main method that is static and it looking for your Dr class.java
See this Example it have two main methods and practice these kinds of question.I also got this kind of problem in starting.
public class TestFirst
{
public static void main(String [] args){
System.out.println(" TestFirst ");
}
}
class Test{
public static void main(String [] args){
System.out.println(" hashmap ");
}
}
if you save pro-gramme by "TestFirst.java" then o/p will come TestFirst if you do some mistake in main method because we have saved our programme by TestFirst then you will get error like you got.
# 2nd mistake may be this
debian#debian:~/Geany_java$ javac Test1.java
debian#debian:~/Geany_java$ java Test1
Exception in thread "main" java.util.NoSuchElementException
at java.util.StringTokenizer.nextToken(StringTokenizer.java:349)
at Test1.main(Test1.java:11)
your classpath has not set properly See above Compiling successfully but running showing same kind of error you got.Which OS is using I can guide you properly.
Check that actually your file have the .java termination nor the .dj
There is nothing wrong with the code.
It is the executing environment which might have problem. Please share the details.
Check if program compiled correctly.
Check time-stamo of .class file.
Check permissions on folder/directory where class-files are getting generated.
Check if DrJAVA has appropriate permission on the directory.
Did you create a file, compiled it with out main?
Check class-path. Might be possible that previous class file is still being found by JDK in classpath.
Try compiling .java file from cmdLine instead of editor.
As others have mentioned, your code is fine. There must be a problem with your environment. I recently experienced a similar issue when investigating and answering this question.
Basically, in that question, the code Void.class instanceof Class resulted in a compiler error because a user-made Class.class existed in the classpath, so one Class (the Java built-in java.lang.Class) didn't match with the given Class (user-made).
Something similar may be at work here. It is possible that there is a user-made String.class in your classpath. Then in your main signature, String[] args would mean an array of your String, when Dr. Java must be looking for a main method taking an array of the Java built-in String, i.e. java.lang.String[]. If you have a custom String class in your classpath (or in your project?), then the Java compiler will choose it over the built-in String. If you were to compile and run your Test class from the command line, then you would get the runtime error: Exception in thread "main" java.lang.NoSuchMethodError: main.
Following #S0urceC0ded's suggestion, you may find this when looking at Test.class in a text editor:
main([LString;)V // A user-made String class
instead of what it's supposed to be:
main([Ljava/lang/String;)V // The built-in java.lang.String class
If so, remove your own String class (at least the .class file, but also the .java file so the .class file isn't re-created) from the classpath, and compile and run your Test class again.
Without a look at your environment, I can't tell for sure that this is the issue. But it can explain it.
If you are using Dr.Java as IDE, then you need to make sure that the main class containing 'public static void main' should be at the very top of your program. Otherwise Dr.Java throws this error during runtime.
Hello I have a main method in a Java class and I would like to access and run my clojure functions from my java classes, is that possible right?
Help please
If you just want to call a function which you have defined in a Clojure script the following code might help you getting the job done:
test.clj:
(ns test)
(defn hello [name]
(println (str "Hi " name "!")))
TestRun.java:
import clojure.lang.RT;
public class TestRun {
public static void main(String[] args) throws Exception {
RT.loadResourceScript("test.clj");
// var(namespace, function name).invoke(parameters..)
RT.var("test", "hello").invoke("Daisy Duck");
}
}
Output:
Hi Daisy Duck!
Make sure you have the Clojure jar on your classpath
Do you have your Clojure code compiled and packaged in a jar? Do you have the jar in your classpath? If so, you should be able to use the classes in the jar just as if there were written in Java.
see the accepted answer to this question: Calling clojure from java
in short you add the mothods you want to expose to your namespace:
(ns com.domain.tiny
(:gen-class
:name com.domain.tiny
:methods [ [binomial [int int] double]]))
then write the functions. compile your class file with maven/leiningen
then call them from java:
System.out.println("(binomial 5 3): " + tiny.binomial(5, 3));
This is just an excerpt. take a look as the origional question.
Check the Java Scripting API for calling functions in script files:
http://download.oracle.com/javase/6/docs/technotes/guides/scripting/programmer_guide/index.html
Most of the top google hits for "calling clojure from java" are outdated and recommend using clojure.lang.RT to compile the source code. Could you help with a clear explanation of how to call Clojure from Java assuming you have already built a jar from the Clojure project and included it in the classpath?
Update: Since this answer was posted, some of the tools available have changed. After the original answer, there is an update including information on how to build the example with current tools.
It isn't quite as simple as compiling to a jar and calling the internal methods. There do seem to be a few tricks to make it all work though. Here's an example of a simple Clojure file that can be compiled to a jar:
(ns com.domain.tiny
(:gen-class
:name com.domain.tiny
:methods [#^{:static true} [binomial [int int] double]]))
(defn binomial
"Calculate the binomial coefficient."
[n k]
(let [a (inc n)]
(loop [b 1
c 1]
(if (> b k)
c
(recur (inc b) (* (/ (- a b) b) c))))))
(defn -binomial
"A Java-callable wrapper around the 'binomial' function."
[n k]
(binomial n k))
(defn -main []
(println (str "(binomial 5 3): " (binomial 5 3)))
(println (str "(binomial 10042 111): " (binomial 10042 111)))
)
If you run it, you should see something like:
(binomial 5 3): 10
(binomial 10042 111): 49068389575068144946633777...
And here's a Java program that calls the -binomial function in the tiny.jar.
import com.domain.tiny;
public class Main {
public static void main(String[] args) {
System.out.println("(binomial 5 3): " + tiny.binomial(5, 3));
System.out.println("(binomial 10042, 111): " + tiny.binomial(10042, 111));
}
}
It's output is:
(binomial 5 3): 10.0
(binomial 10042, 111): 4.9068389575068143E263
The first piece of magic is using the :methods keyword in the gen-class statement. That seems to be required to let you access the Clojure function something like static methods in Java.
The second thing is to create a wrapper function that can be called by Java. Notice that the second version of -binomial has a dash in front of it.
And of course the Clojure jar itself must be on the class path. This example used the Clojure-1.1.0 jar.
Update: This answer has been re-tested using the following tools:
Clojure 1.5.1
Leiningen 2.1.3
JDK 1.7.0 Update 25
The Clojure Part
First create a project and associated directory structure using Leiningen:
C:\projects>lein new com.domain.tiny
Now, change to the project directory.
C:\projects>cd com.domain.tiny
In the project directory, open the project.clj file and edit it such that the contents are as shown below.
(defproject com.domain.tiny "0.1.0-SNAPSHOT"
:description "An example of stand alone Clojure-Java interop"
:url "http://clarkonium.net/2013/06/java-clojure-interop-an-update/"
:license {:name "Eclipse Public License"
:url "http://www.eclipse.org/legal/epl-v10.html"}
:dependencies [[org.clojure/clojure "1.5.1"]]
:aot :all
:main com.domain.tiny)
Now, make sure all of the dependencies (Clojure) are available.
C:\projects\com.domain.tiny>lein deps
You may see a message about downloading the Clojure jar at this point.
Now edit the Clojure file C:\projects\com.domain.tiny\src\com\domain\tiny.clj such that it contains the Clojure program shown in the original answer. (This file was created when Leiningen created the project.)
Much of the magic here is in the namespace declaration. The :gen-class tells the system to create a class named com.domain.tiny with a single static method called binomial, a function taking two integer arguments and returning a double. There are two similarly named functions binomial, a traditional Clojure function, and -binomial and wrapper accessible from Java. Note the hyphen in the function name -binomial. The default prefix is a hyphen, but it can be changed to something else if desired. The -main function just makes a couple of calls to the binomial function to assure that we are getting the correct results. To do that, compile the class and run the program.
C:\projects\com.domain.tiny>lein run
You should see output shown in the original answer.
Now package it up in a jar and put it someplace convenient. Copy the Clojure jar there too.
C:\projects\com.domain.tiny>lein jar
Created C:\projects\com.domain.tiny\target\com.domain.tiny-0.1.0-SNAPSHOT.jar
C:\projects\com.domain.tiny>mkdir \target\lib
C:\projects\com.domain.tiny>copy target\com.domain.tiny-0.1.0-SNAPSHOT.jar target\lib\
1 file(s) copied.
C:\projects\com.domain.tiny>copy "C:<path to clojure jar>\clojure-1.5.1.jar" target\lib\
1 file(s) copied.
The Java Part
Leiningen has a built-in task, lein-javac, that should be able to help with the Java compilation. Unfortunately, it seems to be broken in version 2.1.3. It can't find the installed JDK and it can't find the Maven repository. The paths to both have embedded spaces on my system. I assume that is the problem. Any Java IDE could handle the compilation and packaging too. But for this post, we're going old school and doing it at the command line.
First create the file Main.java with the contents shown in the original answer.
To compile java part
javac -g -cp target\com.domain.tiny-0.1.0-SNAPSHOT.jar -d target\src\com\domain\Main.java
Now create a file with some meta-information to add to the jar we want to build. In Manifest.txt, add the following text
Class-Path: lib\com.domain.tiny-0.1.0-SNAPSHOT.jar lib\clojure-1.5.1.jar
Main-Class: Main
Now package it all up into one big jar file, including our Clojure program and the Clojure jar.
C:\projects\com.domain.tiny\target>jar cfm Interop.jar Manifest.txt Main.class lib\com.domain.tiny-0.1.0-SNAPSHOT.jar lib\clojure-1.5.1.jar
To run the program:
C:\projects\com.domain.tiny\target>java -jar Interop.jar
(binomial 5 3): 10.0
(binomial 10042, 111): 4.9068389575068143E263
The output is essentially identical to that produced by Clojure alone, but the result has been converted to a Java double.
As mentioned, a Java IDE will probably take care of the messy compilation arguments and the packaging.
As of Clojure 1.6.0, there is a new preferred way to load and invoke Clojure functions. This method is now preferred to calling RT directly (and supersedes many of the other answers here). The javadoc is here - the main entry point is clojure.java.api.Clojure.
To lookup and call a Clojure function:
IFn plus = Clojure.var("clojure.core", "+");
plus.invoke(1, 2);
Functions in clojure.core are automatically loaded. Other namespaces can be loaded via require:
IFn require = Clojure.var("clojure.core", "require");
require.invoke(Clojure.read("clojure.set"));
IFns can be passed to higher order functions, e.g. the example below passes plus to read:
IFn map = Clojure.var("clojure.core", "map");
IFn inc = Clojure.var("clojure.core", "inc");
map.invoke(inc, Clojure.read("[1 2 3]"));
Most IFns in Clojure refer to functions. A few, however, refer to non-function data values. To access these, use deref instead of fn:
IFn printLength = Clojure.var("clojure.core", "*print-length*");
IFn deref = Clojure.var("clojure.core", "deref");
deref.invoke(printLength);
Sometimes (if using some other part of the Clojure runtime), you may need to ensure that the Clojure runtime is properly initialized - calling a method on the Clojure class is sufficient for this purpose. If you do not need to call a method on Clojure, then simply causing the class to load is sufficient (in the past there has been a similar recommendation to load the RT class; this is now preferred):
Class.forName("clojure.java.api.Clojure")
EDIT This answer was written in 2010, and worked at that time. See Alex Miller's answer for more modern solution.
What kind of code are calling from Java? If you have class generated with gen-class, then simply call it. If you want to call function from script, then look to following example.
If you want to evaluate code from string, inside Java, then you can use following code:
import clojure.lang.RT;
import clojure.lang.Var;
import clojure.lang.Compiler;
import java.io.StringReader;
public class Foo {
public static void main(String[] args) throws Exception {
// Load the Clojure script -- as a side effect this initializes the runtime.
String str = "(ns user) (defn foo [a b] (str a \" \" b))";
//RT.loadResourceScript("foo.clj");
Compiler.load(new StringReader(str));
// Get a reference to the foo function.
Var foo = RT.var("user", "foo");
// Call it!
Object result = foo.invoke("Hi", "there");
System.out.println(result);
}
}
EDIT: I wrote this answer almost three years ago. In Clojure 1.6 there is a proper API exactly for the purpose of calling Clojure from Java. Please Alex Miller's answer for up to date information.
Original answer from 2011:
As I see it, the simplest way (if you don't generate a class with AOT compilation) is to use clojure.lang.RT to access functions in clojure. With it you can mimic what you would have done in Clojure (no need to compile things in special ways):
;; Example usage of the "bar-fn" function from the "foo.ns" namespace from Clojure
(require 'foo.ns)
(foo.ns/bar-fn 1 2 3)
And in Java:
// Example usage of the "bar-fn" function from the "foo.ns" namespace from Java
import clojure.lang.RT;
import clojure.lang.Symbol;
...
RT.var("clojure.core", "require").invoke(Symbol.intern("foo.ns"));
RT.var("foo.ns", "bar-fn").invoke(1, 2, 3);
It is a bit more verbose in Java, but I hope it's clear that the pieces of code are equivalent.
This should work as long as Clojure and the source files (or compiled files) of your Clojure code is on the classpath.
I agree with clartaq's answer, but I felt that beginners could also use:
step-by-step information on how to actually get this running
information that's current for Clojure 1.3 and recent versions of leiningen.
a Clojure jar that also includes a main function, so it can be run standalone or linked as a library.
So I covered all that in this blog post.
The Clojure code looks like this:
(ns ThingOne.core
(:gen-class
:methods [#^{:static true} [foo [int] void]]))
(defn -foo [i] (println "Hello from Clojure. My input was " i))
(defn -main [] (println "Hello from Clojure -main." ))
The leiningen 1.7.1 project setup looks like this:
(defproject ThingOne "1.0.0-SNAPSHOT"
:description "Hello, Clojure"
:dependencies [[org.clojure/clojure "1.3.0"]]
:aot [ThingOne.core]
:main ThingOne.core)
The Java code looks like this:
import ThingOne.*;
class HelloJava {
public static void main(String[] args) {
System.out.println("Hello from Java!");
core.foo (12345);
}
}
Or you can also get all the code from this project on github.
This works with Clojure 1.5.0:
public class CljTest {
public static Object evalClj(String a) {
return clojure.lang.Compiler.load(new java.io.StringReader(a));
}
public static void main(String[] args) {
new clojure.lang.RT(); // needed since 1.5.0
System.out.println(evalClj("(+ 1 2)"));
}
}
If the use case is to include a JAR built with Clojure in a Java application, I have found having a separate namespace for the interface between the two worlds to be beneficial:
(ns example-app.interop
(:require [example-app.core :as core])
;; This example covers two-way communication: the Clojure library
;; relies on the wrapping Java app for some functionality (through
;; an interface that the Clojure library provides and the Java app
;; implements) and the Java app calls the Clojure library to perform
;; work. The latter case is covered by a class provided by the Clojure lib.
;;
;; This namespace should be AOT compiled.
;; The interface that the java app can implement
(gen-interface
:name com.example.WeatherForecast
:methods [[getTemperature [] Double]])
;; The class that the java app instantiates
(gen-class
:name com.example.HighTemperatureMailer
:state state
:init init
;; Dependency injection - take an instance of the previously defined
;; interface as a constructor argument
:constructors {[com.example.WeatherForecast] []}
:methods [[sendMails [] void]])
(defn -init [weather-forecast]
[[] {:weather-forecast weather-forecast}])
;; The actual work is done in the core namespace
(defn -sendMails
[this]
(core/send-mails (.state this)))
The core namespace can use the injected instance to accomplish its tasks:
(ns example-app.core)
(defn send-mails
[{:keys [weather-forecast]}]
(let [temp (.getTemperature weather-forecast)] ...))
For testing purposes, the interface can be stubbed:
(example-app.core/send-mails
(reify com.example.WeatherForecast (getTemperature [this] ...)))
Other technique that works also with other languages on top of JVM is to declare an interface for functions you want to call and then use 'proxy' function to create instance that implemennts them.
You can also use AOT compilation to create class files representing your clojure code. Read the documentation about compilation, gen-class and friends in the Clojure API docs for the details about how to do this, but in essence you will create a class that calls clojure functions for each method invocation.
Another alternative is to use the new defprotocol and deftype functionality, which will also require AOT compilation but provide better performance. I don't know the details of how to do this yet, but a question on the mailing list would probably do the trick.