Java used heap vs. allocated object size - java

I have one probably dumb question. I am currently testing CSP solvers choco and jacop. When I run profiling of the app (graph colouring, about 3000 nodes), I dont fully understand the results.
The used heap space declared by profiler is about 1GB of memory. The sum of all object created is less than 100MB. Where are the other 900MB of RAM?
I think that method calls (solvers probably use massive backtracking) are being alocated on stack, so here should not be the problem. When I reduce maximum memory by using Xmx param, the app fails with exception:
Exception in thread "main" java.lang.OutOfMemoryError: GC overhead limit exceeded
So it seems, that the rest isnt unused uncollected memory (because in this case the GC would dealocate it (and would not fail)).
Thanks for your help.

Can you get a map of the heap? Most likely it's fragmented so those 100M of objects are spread out across the entire memory space. The memory needed is both a function of allocated objects and how fast they're being allocated and then de-referenced. That error means the memory area is too small for the work load, the garbage collector is consuming a lot CPU managing it, and it went beyond the allowed threshold.

Amir Afghani was probably correct in his comment. The classes (objects) in Netbeans 6.9.1 are probably somehow filtered (?or the profiler is bogus?), because when I performed the heap dump from java visual VM and analyzed it, it showed me !very! different numbers (which were in sum the same as the used heap).
Thanks for your replies.

Related

Tomcat JVM - which memory parameter to increase after Heap Memory Statistics

I am having
java.lang.OutOfMemoryError: Java heap space
Which parameters would you increase for the Tomcat after knowing the following Heap Memory Statistics?
Heap Memory Statistics
The parameter that defines maximum heap size is -Xmx but do not simply change it without knowing the reason you run out of memory! Apart from it there are many other parameters that influence how your memory is structured and garbage collected.
To give you a simple analogy, it's like a bucket of water. It can only fit given amount of water. If you know you need more water, you can get a bigger bucket. But if you are constantly pouring more water into it than you consume, the size of the bucket does not matter - it will fill up sooner or later. In programing this is called memory leak.
That is why you should not simply increase heap size. You need to do some analysis to understand why you are running out of memory and if adding more memory would solve the problem or simply postpone it. Now to do perform those analysis exactly is by far too broad question to be answered here.

Dropbox "java.lang.outofmemoryerror java heap space" when trying to upload a large file [duplicate]

I am getting the following error on execution of a multi-threading program
java.lang.OutOfMemoryError: Java heap space
The above error occured in one of the threads.
Upto my knowledge, Heap space is occupied by instance variables only. If this is correct, then why this error occurred after running fine for sometime as space for instance variables are alloted at the time of object creation.
Is there any way to increase the heap space?
What changes should I made to my program so that It will grab less heap space?
If you want to increase your heap space, you can use java -Xms<initial heap size> -Xmx<maximum heap size> on the command line. By default, the values are based on the JRE version and system configuration. You can find out more about the VM options on the Java website.
However, I would recommend profiling your application to find out why your heap size is being eaten. NetBeans has a very good profiler included with it. I believe it uses the jvisualvm under the hood. With a profiler, you can try to find where many objects are being created, when objects get garbage collected, and more.
1.- Yes, but it pretty much refers to the whole memory used by your program.
2.- Yes see Java VM options
-Xms<size> set initial Java heap size
-Xmx<size> set maximum Java heap size
Ie
java -Xmx2g assign 2 gigabytes of ram as maximum to your app
But you should see if you don't have a memory leak first.
3.- It depends on the program. Try spot memory leaks. This question would be to hard to answer. Lately you can profile using JConsole to try to find out where your memory is going to
You may want to look at this site to learn more about memory in the JVM:
http://developer.streamezzo.com/content/learn/articles/optimization-heap-memory-usage
I have found it useful to use visualgc to watch how the different parts of the memory model is filling up, to determine what to change.
It is difficult to determine which part of memory was filled up, hence visualgc, as you may want to just change the part that is having a problem, rather than just say,
Fine! I will give 1G of RAM to the JVM.
Try to be more precise about what you are doing, in the long run you will probably find the program better for it.
To determine where the memory leak may be you can use unit tests for that, by testing what was the memory before the test, and after, and if there is too big a change then you may want to examine it, but, you need to do the check while your test is still running.
You can get your heap memory size through below programe.
public class GetHeapSize {
public static void main(String[] args) {
long heapsize = Runtime.getRuntime().totalMemory();
System.out.println("heapsize is :: " + heapsize);
}
}
then accordingly you can increase heap size also by using:
java -Xmx2g
http://www.oracle.com/technetwork/java/javase/tech/vmoptions-jsp-140102.html
To increase the heap size you can use the -Xmx argument when starting Java; e.g.
-Xmx256M
Upto my knowledge, Heap space is occupied by instance variables only. If this is correct, then why this error occurred after running fine for sometime as space for instance variables are alloted at the time of object creation.
That means you are creating more objects in your application over a period of time continuously. New objects will be stored in heap memory and that's the reason for growth in heap memory.
Heap not only contains instance variables. It will store all non-primitive data types ( Objects). These objects life time may be short (method block) or long (till the object is referenced in your application)
Is there any way to increase the heap space?
Yes. Have a look at this oracle article for more details.
There are two parameters for setting the heap size:
-Xms:, which sets the initial and minimum heap size
-Xmx:, which sets the maximum heap size
What changes should I made to my program so that It will grab less heap space?
It depends on your application.
Set the maximum heap memory as per your application requirement
Don't cause memory leaks in your application
If you find memory leaks in your application, find the root cause with help of profiling tools like MAT, Visual VM , jconsole etc. Once you find the root cause, fix the leaks.
Important notes from oracle article
Cause: The detail message Java heap space indicates object could not be allocated in the Java heap. This error does not necessarily imply a memory leak.
Possible reasons:
Improper configuration ( not allocating sufficiant memory)
Application is unintentionally holding references to objects and this prevents the objects from being garbage collected
Applications that make excessive use of finalizers. If a class has a finalize method, then objects of that type do not have their space reclaimed at garbage collection time. If the finalizer thread cannot keep up, with the finalization queue, then the Java heap could fill up and this type of OutOfMemoryError exception would be thrown.
On a different note, use better Garbage collection algorithms ( CMS or G1GC)
Have a look at this question for understanding G1GC
In most of the cases, the code is not optimized. Release those objects which you think shall not be needed further. Avoid creation of objects in your loop each time. Try to use caches. I don't know how your application is doing. But In programming, one rule of normal life applies as well
Prevention is better than cure. "Don't create unnecessary objects"
Local variables are located on the stack. Heap space is occupied by objects.
You can use the -Xmx option.
Basically heap space is used up everytime you allocate a new object with new and freed some time after the object is no longer referenced. So make sure that you don't keep references to objects that you no longer need.
No, I think you are thinking of stack space. Heap space is occupied by objects. The way to increase it is -Xmx256m, replacing the 256 with the amount you need on the command line.
To avoid that exception, if you are using JUnit and Spring try adding this in every test class:
#DirtiesContext(classMode = DirtiesContext.ClassMode.AFTER_CLASS)
I have tried all Solutions but nothing worked from above solutions
Solution: In My case I was using 4GB RAM and due to that RAM usage comes out 98% so the required amount if Memory wasn't available. Please do look for this also.If such issue comes upgrade RAM and it will work fine.
Hope this will save someone Time
In netbeans, Go to 'Run' toolbar, --> 'Set Project Configuration' --> 'Customise' --> 'run' of its popped up windo --> 'VM Option' --> fill in '-Xms2048m -Xmx2048m'. It could solve heap size problem.

Why I am getting java.lang.OutOfMemoryError?

I am getting:
java.lang.OutOfMemoryError : Java heap space
Caused by: java.lang.OutOfMemoryError: Java heap space
at java.util.Arrays.copyOf(Arrays.java:2894)
at java.lang.AbstractStringBuilder.expandCapacity(AbstractStringBuilder.java:117)
at java.lang.AbstractStringBuilder.append(AbstractStringBuilder.java:407)
at java.lang.StringBuilder.append(StringBuilder.java:136)
ltimately you always have a finite max of heap to use no matter what platform you are running on. In Windows 32 bit this is around 2gb (not specifically heap but total amount of memory per process). It just happens that Java happens to make the default smaller (presumably so that the programmer can't create programs that have runaway memory allocation without running into this problem and having to examine exactly what they are doing).
So this given there are several approaches you could take to either determine what amount of memory you need or to reduce the amount of memory you are using. One common mistake with garbage collected languages such as Java or C# is to keep around references to objects that you no longer are using, or allocating many objects when you could reuse them instead. As long as objects have a reference to them they will continue to use heap space as the garbage collector will not delete them.
In this case you can use a Java memory profiler to determine what methods in your program are allocating large number of objects and then determine if there is a way to make sure they are no longer referenced, or to not allocate them in the first place. One option which I have used in the past is "JMP" http://www.khelekore.org/jmp/.
If you determine that you are allocating these objects for a reason and you need to keep around references (depending on what you are doing this might be the case), you will just need to increase the max heap size when you start the program. However, once you do the memory profiling and understand how your objects are getting allocated you should have a better idea about how much memory you need.
In general if you can't guarantee that your program will run in some finite amount of memory (perhaps depending on input size) you will always run into this problem. Only after exhausting all of this will you need to look into caching objects out to disk etc. At this point you should have a very good reason to say "I need Xgb of memory" for something and you can't work around it by improving your algorithms or memory allocation patterns. Generally this will only usually be the case for algorithms operating on large datasets (like a database or some scientific analysis program) and then techniques like caching and memory mapped IO become useful.
The OutOfMemoryError is usually caused by the VM not having enough memory to run your project. Did you run it directly from the command line or did you use an IDE ?
For example, Try running your programm with adding the -Xmx1G option which allocate 1Go of memory heap to your programm, you can of course adjust it to your convenience. the G is for Go and the m is for Mb.
You should give the heap a bigger size for it to work.

Is it good to set the max and min JVM heap size the same?

Currently in our testing environment the max and min JVM heap size are set to the same value, basically as much as the dedicated server machine will allow for our application. Is this the best configuration for performance or would giving the JVM a range be better?
Peter 's answer is correct in that -Xms is allocated at startup and it will grow up to -Xmx (max heap size) but it's a little misleading in how he has worded his answer. (Sorry Peter I know you know this stuff cold).
Setting ms == mx effectively turns off this behavior. While this used to be a good idea in older JVMs, it is no longer the case. Growing and shrinking the heap allows the JVM to adapt to increases in pressure on memory yet reduce pause time by shrinking the heap when memory pressure is reduced. Sometimes this behavior doesn't give you the performance benefits you'd expect and in those cases it's best to set mx == ms.
OOME is thrown when heap is more than 98% of time is spent collecting and the collections cannot recover more than 2% of that. If you are not at max heaps size then the JVM will simply grow so that you're beyond that boundaries. You cannot have an OutOfMemoryError on startup unless your heap hits the max heap size and meets the other conditions that define an OutOfMemoryError.
For the comments that have come in since I posted. I don't know what the JMonitor blog entry is showing but this is from the PSYoung collector.
size_t desired_size = MAX2(MIN2(eden_plus_survivors, gen_size_limit()),
min_gen_size());
I could do more digging about but I'd bet I'd find code that serves the same purpose in the ParNew and PSOldGen and CMS Tenured implementations. In fact it's unlikely that CMS would be able to return memory unless there has been a Concurrent Mode Failure. In the case of a CMF the serial collector will run and that should include a compaction after which top of heap would most likely be clean and therefore eligible to be deallocated.
Main reason to set the -Xms is for if you need a certain heap on start up. (Prevents OutOfMemoryErrors from happening on start up.) As mentioned above, if you need the startup heap to match the max heap is when you would match it. Otherwise you don't really need it. Just asks the application to take up more memory that it may ultimately need. Watching your memory use over time (profiling) while load testing and using your application should give you a good feel for what to need to set them to. But it isn't the worse thing to set them to the same on start up. For a lot of our apps, I actually start out with something like 128, 256, or 512 for min (startup) and one gigabyte for max (this is for non application server applications).
Just found this question on stack overflow which may also be helpful side-effect-for-increasing-maxpermsize-and-max-heap-size. Worth the look.
AFAIK, setting both to the same size does away with the additional step of heap resizing which might be in your favour if you pretty much know how much heap you are going to use. Also, having a large heap size reduces GC invocations to the point that it happens very few times. In my current project (risk analysis of trades), our risk engines have both Xmx and Xms to the same value which pretty large (around 8Gib). This ensures that even after an entire day of invoking the engines, almost no GC takes place.
Also, I found an interesting discussion here.
Definitely yes for a server app. What's the point of having so much memory but not using it?
(No it doesn't save electricity if you don't use a memory cell)
JVM loves memory. For a given app, the more memory JVM has, the less GC it performs. The best part is more objects will die young and less will tenure.
Especially during a server startup, the load is even higher than normal. It's brain dead to give server a small memory to work with at this stage.
From what I see here at http://java-monitor.com/forum/showthread.php?t=427
the JVM under test begins with the Xms setting, but WILL deallocate memory it doesn't need and it will take it upto the Xmx mark when it needs it.
Unless you need a chunk of memory dedicated for a big memory consumer initially, there's not much of a point in putting in a high Xms=Xmx. Looks like deallocation and allocation occur even with Xms=Xmx

How to get just free heap size (not together w stack/method mem) in Java?

I want to calculate the heap usage for my app. I would like to get a procent value of Heap size only.
How do I get the value in code for the current running app?
EDIT
There was an upvoted answer that was NOT complete/correct. The values returned by those methods include stack and method area too, and I need to monitor only heap size.
With that code I got HeapError exception when I reached 43%, so I can't use those methods to monitor just heap
Runtime.getRuntime().totalMemory()
dbyme's answer is not accurate - these Runtime calls give you an amount of memory used by JVM, but this memory does not consist only of heap , there is also stack and method area e.g.
This information is exposed over the JMX management interface. If you simply want to look at it, JConsole or visualvm (part of the JDK, installed in JAVA_HOME/bin) can display nice graphs of a JVM's memory usage, optionally broken down into the various memory pools.
This interface can also be accessed programmatically; see MemoryMXBean.
MemoryMXBean bean = ManagementFactory.getMemoryMXBean();
bean.getHeapMemoryUsage().getUsed();
There really is no good answer, since how much heap memory the JVM has free is not the same as how much heap memory the operating system has free, which are both not the same as how much heap memory can be assigned to your application.
This is because the JVM and OS heaps are different. When the JVM runs out of memory, it may run garbage-collection, defragment its own heap, or request more memory from the OS. Since unused non-garbage-collected objects still exist, but are technically "free", they make the concept of free memory a bit fuzzy.
Also, heap memory fragments; how/when/if memory is defragmented is up to the implementation of the JVM/OS. For example, the OS-heap may have 100MB of free memory, but due to fragmentation, the largest available contiguous space may be 2MB. Thus, if the JVM requests 3MB, it may get an out-of-memory error, even though 100MB are still available. It is not possible for the JVM to know ahead of time that the OS won't be able to allocate that 3MB.

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