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Hibernate java.lang.NoClassDefFoundError: org/apache/commons/collections/MultiMap

Every time I'm trying to refresh database scheme for Hibernate Reverse Engineering File I get Unhandled event loop exception:
Hibernate Reverse Engineering File
java.lang.NoClassDefFoundError: org/apache/commons/collections/MultiMap
at java.lang.Class.getDeclaredMethods0(Native Method)
at java.lang.Class.privateGetDeclaredMethods(Unknown Source)
at java.lang.Class.privateGetMethodRecursive(Unknown Source)
at java.lang.Class.getMethod0(Unknown Source)
at java.lang.Class.getMethod(Unknown Source)
at org.jboss.tools.hibernate.runtime.common.Util.invokeMethod(Util.java:41)
at org.jboss.tools.hibernate.runtime.common.AbstractOverrideRepositoryFacade.addTableFilter(AbstractOverrideRepositoryFacade.java:31)
at org.hibernate.eclipse.mapper.editors.ReverseEngineeringEditor.getLazyDatabaseSchema(ReverseEngineeringEditor.java:219)
at org.hibernate.eclipse.mapper.editors.reveng.TypeMappingFormPart$1.doRefreshTree(TypeMappingFormPart.java:57)
at org.hibernate.eclipse.console.wizards.TreeToTableComposite$6.widgetSelected(TreeToTableComposite.java:400)
at org.eclipse.swt.widgets.TypedListener.handleEvent(TypedListener.java:248)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:84)
at org.eclipse.swt.widgets.Display.sendEvent(Display.java:4362)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:1113)
at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:4180)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3769)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine$4.run(PartRenderingEngine.java:1127)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
at org.eclipse.e4.ui.internal.workbench.swt.PartRenderingEngine.run(PartRenderingEngine.java:1018)
at org.eclipse.e4.ui.internal.workbench.E4Workbench.createAndRunUI(E4Workbench.java:156)
at org.eclipse.ui.internal.Workbench$5.run(Workbench.java:694)
at org.eclipse.core.databinding.observable.Realm.runWithDefault(Realm.java:337)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:606)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:150)
at org.eclipse.ui.internal.ide.application.IDEApplication.start(IDEApplication.java:139)
at org.eclipse.equinox.internal.app.EclipseAppHandle.run(EclipseAppHandle.java:196)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:134)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:104)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:380)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:235)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.eclipse.equinox.launcher.Main.invokeFramework(Main.java:669)
at org.eclipse.equinox.launcher.Main.basicRun(Main.java:608)
at org.eclipse.equinox.launcher.Main.run(Main.java:1515)
Caused by: java.lang.ClassNotFoundException: org.apache.commons.collections.MultiMap cannot be found by org.jboss.tools.hibernate.runtime.v_5_1_5.0.1.Final-v20160331-1852-B88
at org.eclipse.osgi.internal.loader.BundleLoader.findClassInternal(BundleLoader.java:439)
at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:352)
at org.eclipse.osgi.internal.loader.BundleLoader.findClass(BundleLoader.java:344)
at org.eclipse.osgi.internal.loader.ModuleClassLoader.loadClass(ModuleClassLoader.java:160)
at java.lang.ClassLoader.loadClass(Unknown Source)
... 37 more
However, I put commons-collections-3.2.2.jar and commons-collections-3.2.2-javadoc.jar as in Build Path, so in WebContent/WEB-INF/lib: Project Explorer
Anybody knows how to solve this problem?

I had downgraded hibernate version to 4.3 via Hibernate Console Configuration and created configuration (Hibernate Perspective - Run Hibernate - Hibernate Code Generation Configuration), and it started working.

Alfresco 3.3. community won't start again

Ubuntu-server Alfresco was working fine before, but now I get some errors. I'm doing nothing except changing the Admin password via Web-interface and cleaning of old log files.
Now I get 404 error. The log is provided below:
11:40:10,390 ERROR [org.springframework.web.context.ContextLoader] Context initialization failed
org.alfresco.service.cmr.rendition.RenditionServiceException: 09250000 Unable to find rendering action root node.
at org.alfresco.repo.rendition.RenditionDefinitionPersisterImpl.checkRenderingActionRootNodeExists(RenditionDefinitionPersisterImpl.java:199)
at org.alfresco.repo.rendition.RenditionDefinitionPersisterImpl.findActionNode(RenditionDefinitionPersisterImpl.java:154)
at org.alfresco.repo.rendition.RenditionDefinitionPersisterImpl.findOrCreateActionNode(RenditionDefinitionPersisterImpl.java:177)
at org.alfresco.repo.rendition.RenditionDefinitionPersisterImpl.saveRenditionDefinition(RenditionDefinitionPersisterImpl.java:143)
at org.alfresco.repo.rendition.RenditionServiceImpl.saveRenditionDefinition(RenditionServiceImpl.java:233)
at org.alfresco.repo.thumbnail.ThumbnailRegistry$1.doWork(ThumbnailRegistry.java:160)
at org.alfresco.repo.thumbnail.ThumbnailRegistry$1.doWork(ThumbnailRegistry.java:149)
at org.alfresco.repo.security.authentication.AuthenticationUtil.runAs(AuthenticationUtil.java:508)
at org.alfresco.repo.thumbnail.ThumbnailRegistry.initThumbnailDefinitions(ThumbnailRegistry.java:148)
at org.alfresco.repo.thumbnail.ThumbnailRegistry.access$400(ThumbnailRegistry.java:49)
at org.alfresco.repo.thumbnail.ThumbnailRegistry$RegistryLifecycle.onBootstrap(ThumbnailRegistry.java:271)
at org.springframework.extensions.surf.util.AbstractLifecycleBean.onApplicationEvent(AbstractLifecycleBean.java:56)
at org.alfresco.repo.thumbnail.ThumbnailRegistry.onApplicationEvent(ThumbnailRegistry.java:255)
at org.alfresco.repo.thumbnail.ThumbnailRegistry.onApplicationEvent(ThumbnailRegistry.java:49)
at org.springframework.context.event.SimpleApplicationEventMulticaster.multicastEvent(SimpleApplicationEventMulticaster.java:97)
at org.springframework.context.support.AbstractApplicationContext.publishEvent(AbstractApplicationContext.java:294)
at org.springframework.context.support.AbstractApplicationContext.finishRefresh(AbstractApplicationContext.java:858)
at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:419)
at org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:261)
at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:192)
at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)
at org.alfresco.web.app.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:63)
at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:3972)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4467)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:791)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:771)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:546)
at org.apache.catalina.startup.HostConfig.deployDescriptor(HostConfig.java:637)
at org.apache.catalina.startup.HostConfig.deployDescriptors(HostConfig.java:563)
at org.apache.catalina.startup.HostConfig.deployApps(HostConfig.java:498)
at org.apache.catalina.startup.HostConfig.start(HostConfig.java:1277)
at org.apache.catalina.startup.HostConfig.lifecycleEvent(HostConfig.java:321)
at org.apache.catalina.util.LifecycleSupport.fireLifecycleEvent(LifecycleSupport.java:119)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:785)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1045)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:443)
at org.apache.catalina.core.StandardService.start(StandardService.java:519)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:710)
at org.apache.catalina.startup.Catalina.start(Catalina.java:581)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
Does anyone know what could be wrong? I can provide additional information if you ask; just tell me what you want to see.
So, I've done all what Gagravarr said, thanks for Him. Error "root node" has disappeared.
I got some new errors but all been fixed, except one:
Will try to resolve it myself. If not I will ask here again. Thanks!

could not initialize class org.apache.xerces.jaxp.datatype.xmlgregoriancalendar

I am using web services(a custom/tailor made service for the component) to send and receive information. The request is being formed properly and I am also getting a response. However, during the the mapping of the response to actual DTO, I am getting the following error:
could not initialize class org.apache.xerces.jaxp.datatype.xmlgregoriancalendar
There are some calednar date form in the response, but I am not sure, why it is not able to initialize xmlgregoriancalendar class. I run it on my local with stubs, and it give me no problems at all.
any adivse would be helpful...Thanks in advance
Complete Stack Trace is as follows:
FindOrderController :: Exception encountered :: OrderRef :: 1185130652 :: UserId :: null : com.bt.collaboration.order.web.controller.FindOrderController-(340)
javax.xml.ws.WebServiceException: org.apache.cxf.interceptor.Fault: Unmarshalling Error: Could not initialize class org.apache.xerces.jaxp.datatype.XMLGregorianCalendarImpl
at org.apache.cxf.jaxws.JaxWsClientProxy.invoke(JaxWsClientProxy.java:144)
at $Proxy489.querySimplifiedOrder(Unknown Source)
at com.bt.collaboration.customer.client.mcso.McsoSyncPortClientImpl.findHeavyOrderByOrderRef(McsoSyncPortClientImpl.java:146)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
at com.bt.custc.logging.performance.OutboundLoggingInterceptor.invoke(OutboundLoggingInterceptor.java:109)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
at $Proxy490.findHeavyOrderByOrderRef(Unknown Source)
at com.bt.collaboration.customer.service.OrderServiceImpl.findHeavyOrderByOrderRef(OrderServiceImpl.java:65)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
at com.bt.custc.logging.performance.OutboundLoggingInterceptor.invoke(OutboundLoggingInterceptor.java:109)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at com.bt.netc.frameworks.throttle.ThrottleInterceptorImpl.invoke(ThrottleInterceptorImpl.java:92)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at org.springframework.aop.interceptor.ExposeInvocationInterceptor.invoke(ExposeInvocationInterceptor.java:89)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
at $Proxy498.findHeavyOrderByOrderRef(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
at com.bt.custc.logging.performance.OutboundLoggingInterceptor.invoke(OutboundLoggingInterceptor.java:109)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
at $Proxy498.findHeavyOrderByOrderRef(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:182)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:149)
at com.bt.custc.logging.performance.OutboundLoggingInterceptor.invoke(OutboundLoggingInterceptor.java:109)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:171)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:204)
at $Proxy499.findHeavyOrderByOrderRef(Unknown Source)
at com.bt.collaboration.order.web.controller.FindOrderController.handleRequestInternal(FindOrderController.java:255)
at org.springframework.web.servlet.mvc.AbstractController.handleRequest(AbstractController.java:153)
at org.springframework.web.servlet.mvc.SimpleControllerHandlerAdapter.handle(SimpleControllerHandlerAdapter.java:48)
at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:875)
at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:807)
at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:571)
at org.springframework.web.servlet.FrameworkServlet.doPost(FrameworkServlet.java:511)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:727)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:820)
at weblogic.servlet.internal.StubSecurityHelper$ServletServiceAction.run(StubSecurityHelper.java:227)
at weblogic.servlet.internal.StubSecurityHelper.invokeServlet(StubSecurityHelper.java:125)
at weblogic.servlet.internal.ServletStubImpl.execute(ServletStubImpl.java:301)
at weblogic.servlet.internal.TailFilter.doFilter(TailFilter.java:26)
at weblogic.servlet.internal.FilterChainImpl.doFilter(FilterChainImpl.java:56)
at com.bt.netc.frameworks.filters.FilterProxyImpl.doFilter(FilterProxyImpl.java:83)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:236)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167)
at weblogic.servlet.internal.FilterChainImpl.doFilter(FilterChainImpl.java:56)
at com.opensymphony.sitemesh.webapp.SiteMeshFilter.obtainContent(SiteMeshFilter.java:129)
at com.opensymphony.sitemesh.webapp.SiteMeshFilter.doFilter(SiteMeshFilter.java:77)
at weblogic.servlet.internal.FilterChainImpl.doFilter(FilterChainImpl.java:56)
at com.bt.collaboration.order.web.filter.PropertySetupFilter.doFilter(PropertySetupFilter.java:36)
at weblogic.servlet.internal.FilterChainImpl.doFilter(FilterChainImpl.java:56)
at weblogic.servlet.internal.WebAppServletContext$ServletInvocationAction.wrapRun(WebAppServletContext.java:3730)
at weblogic.servlet.internal.WebAppServletContext$ServletInvocationAction.run(WebAppServletContext.java:3696)
at weblogic.security.acl.internal.AuthenticatedSubject.doAs(AuthenticatedSubject.java:321)
at weblogic.security.service.SecurityManager.runAs(SecurityManager.java:120)
at weblogic.servlet.internal.WebAppServletContext.securedExecute(WebAppServletContext.java:2273)
at weblogic.servlet.internal.WebAppServletContext.execute(WebAppServletContext.java:2179)
at weblogic.servlet.internal.ServletRequestImpl.run(ServletRequestImpl.java:1490)
at weblogic.work.ExecuteThread.execute(ExecuteThread.java:256)
at weblogic.work.ExecuteThread.run(ExecuteThread.java:221)
Caused by: org.apache.cxf.interceptor.Fault: Unmarshalling Error: Could not initialize class org.apache.xerces.jaxp.datatype.XMLGregorianCalendarImpl
at org.apache.cxf.jaxb.JAXBEncoderDecoder.unmarshall(JAXBEncoderDecoder.java:771)
at org.apache.cxf.jaxb.JAXBEncoderDecoder.unmarshall(JAXBEncoderDecoder.java:623)
at org.apache.cxf.jaxb.io.DataReaderImpl.read(DataReaderImpl.java:128)
at org.apache.cxf.interceptor.DocLiteralInInterceptor.handleMessage(DocLiteralInInterceptor.java:190)
at org.apache.cxf.phase.PhaseInterceptorChain.doIntercept(PhaseInterceptorChain.java:236)
at org.apache.cxf.endpoint.ClientImpl.onMessage(ClientImpl.java:671)
at org.apache.cxf.transport.http.HTTPConduit$WrappedOutputStream.handleResponseInternal(HTTPConduit.java:2177)
at org.apache.cxf.transport.http.HTTPConduit$WrappedOutputStream.handleResponse(HTTPConduit.java:2057)
at org.apache.cxf.transport.http.HTTPConduit$WrappedOutputStream.close(HTTPConduit.java:1982)
at org.apache.cxf.io.CacheAndWriteOutputStream.postClose(CacheAndWriteOutputStream.java:47)
at org.apache.cxf.io.CachedOutputStream.close(CachedOutputStream.java:188)
at org.apache.cxf.transport.AbstractConduit.close(AbstractConduit.java:66)
at org.apache.cxf.transport.http.HTTPConduit.close(HTTPConduit.java:637)
at org.apache.cxf.interceptor.MessageSenderInterceptor$MessageSenderEndingInterceptor.handleMessage(MessageSenderInterceptor.java:62)
at org.apache.cxf.phase.PhaseInterceptorChain.doIntercept(PhaseInterceptorChain.java:236)
at org.apache.cxf.endpoint.ClientImpl.invoke(ClientImpl.java:483)
at org.apache.cxf.endpoint.ClientImpl.invoke(ClientImpl.java:309)
at org.apache.cxf.endpoint.ClientImpl.invoke(ClientImpl.java:261)
at org.apache.cxf.frontend.ClientProxy.invokeSync(ClientProxy.java:73)
at org.apache.cxf.jaxws.JaxWsClientProxy.invoke(JaxWsClientProxy.java:124)
... 83 more
Caused by: java.lang.NoClassDefFoundError: Could not initialize class org.apache.xerces.jaxp.datatype.XMLGregorianCalendarImpl
at org.apache.xerces.jaxp.datatype.DatatypeFactoryImpl.newXMLGregorianCalendar(Unknown Source)
at com.sun.xml.bind.v2.model.impl.RuntimeBuiltinLeafInfoImpl$12.parse(RuntimeBuiltinLeafInfoImpl.java:583)
at com.sun.xml.bind.v2.model.impl.RuntimeBuiltinLeafInfoImpl$12.parse(RuntimeBuiltinLeafInfoImpl.java:662)
at com.sun.xml.bind.v2.runtime.reflect.TransducedAccessor$CompositeTransducedAccessorImpl.parse(TransducedAccessor.java:247)
at com.sun.xml.bind.v2.runtime.unmarshaller.LeafPropertyLoader.text(LeafPropertyLoader.java:65)
at com.sun.xml.bind.v2.runtime.unmarshaller.UnmarshallingContext.text(UnmarshallingContext.java:515)
at com.sun.xml.bind.v2.runtime.unmarshaller.StAXStreamConnector.processText(StAXStreamConnector.java:339)
at com.sun.xml.bind.v2.runtime.unmarshaller.StAXStreamConnector.handleEndElement(StAXStreamConnector.java:217)
at com.sun.xml.bind.v2.runtime.unmarshaller.StAXStreamConnector.bridge(StAXStreamConnector.java:186)
at com.sun.xml.bind.v2.runtime.unmarshaller.UnmarshallerImpl.unmarshal0(UnmarshallerImpl.java:368)
at com.sun.xml.bind.v2.runtime.unmarshaller.UnmarshallerImpl.unmarshal(UnmarshallerImpl.java:347)
at org.apache.cxf.jaxb.JAXBEncoderDecoder.unmarshall(JAXBEncoderDecoder.java:749)
... 102 more

I also got this error: NoClassDefFoundError: Could not initialize class org.apache.xerces.jaxp.datatype.XMLGregorianCalendarImpl
Here is how I fixed it. Add in weblogic.xml this line:
{prefer-web-inf-classes}true{/prefer-web-inf-classes}
By default it's false.
This fix tells me there are jar version conflicts. But I have no idea exactly which jars in what folder that cause the conflicts.

why tomcat is not aware of refactoring package name in eclipse

I changed few packages names in my JAVA project but when starting tomcat again after the change, it tries to get the old package name.(throwes java.lang.ClassNotFoundException)
I get the following exception when trying to re-build my application:
org.apache.catalina.loader.StandardClassLoader#6eb38a
com.project.linkedin.LinkedInService
java.lang.ClassNotFoundException: com.project.linkedin.LinkedInService
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1680)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1526)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1128)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:1026)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4421)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4734)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:840)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1057)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
what am I doing wrong?
is there a need to change something in the tomcat properties as well?
Thanks in advance!!

Fix your web.xml, probably it references LinkedInService with old package name

PropertyAccessorFactory NoClassDefFoundError when running the spring application

I am facing below exception when initializing the spring application? I dont have a clue what jar is missing. I have below jars in my classpath,
spring-2.5.jar
spring-test-2.5.jar
spring-webmvc-2.5.5.jar
standard-1.1.2-sources.jar
jstl-1.2.jar
commons-logging-1.0.4.jar
java.lang.NoClassDefFoundError: org/springframework/beans/PropertyAccessorFactory
INFO: Starting Servlet Engine: Apache Tomcat/6.0.32
29-Apr-2012 23:00:49 org.apache.catalina.core.ApplicationContext log
SEVERE: StandardWrapper.Throwable
java.lang.NoClassDefFoundError: org/springframework/beans/PropertyAccessorFactory
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:114)
at javax.servlet.GenericServlet.init(GenericServlet.java:212)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1173)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:993)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4420)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4733)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:840)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
Caused by: java.lang.ClassNotFoundException: org.springframework.beans.PropertyAccessorFactory
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1680)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1526)
... 19 more
29-Apr-2012 23:00:49 org.apache.catalina.core.StandardContext loadOnStartup
SEVERE: Servlet /springmvc threw load() exception
java.lang.ClassNotFoundException: org.springframework.beans.PropertyAccessorFactory
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1680)
at org.apache.catalina.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1526)
at org.springframework.web.servlet.HttpServletBean.init(HttpServletBean.java:114)
at javax.servlet.GenericServlet.init(GenericServlet.java:212)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1173)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:993)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4420)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:4733)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
at org.apache.catalina.core.StandardHost.start(StandardHost.java:840)
at org.apache.catalina.core.ContainerBase.start(ContainerBase.java:1053)
at org.apache.catalina.core.StandardEngine.start(StandardEngine.java:463)
at org.apache.catalina.core.StandardService.start(StandardService.java:525)
at org.apache.catalina.core.StandardServer.start(StandardServer.java:754)
at org.apache.catalina.startup.Catalina.start(Catalina.java:595)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:289)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:414)
29-Apr-2012 23:00:49 org.apache.coyote.http11.Http11Protocol start

You are using spring webmvc 2.5.5, but only spring 2.5 - try using spring-2.5.5.jar, OR add spring-beans-2.5.5.jar.
You better use the same version for all spring components.

You're missing the spring beans jar - spring-beans-<version>.jar