Technology to transfer data with external system - java

We have an interface with an external system in which we get flat files from them and process those files. At present we run a job a few times a day that checks if the file is at the ftp location and then processes if it exists.
I recently read that it is a bad idea to make use of file systems as a message broker which is why I am putting in this question. Can someone clarify if a situation like this one is a right fitment for the use of some other tool and if so which one?
Ours is a java based application.

The first question you should ask is "is it working?".
If the answer to that is yes, then you should be circumspect about change just because you read it was a bad idea. I've read that chocolate may be bad for you but I'm not giving it up :-)
There are potential problems that you can run into, such as files being deleted without your knowledge, or trying to process files that are only half-transferred (though there are ways to mitigate both of those, such as permissions in the former case, or the use of sentinel files or content checking in the latter case).
Myself, I would prefer a message queueing system such as IBM's MQ or JMS (since that's what they're built for, and they do make life a little easier) but, as per the second paragraph above, only if either:
problems appear or become evident with the current solution; or
you have some spare time and money lying around for unnecessary rework.
The last bullet needs expansion. While the work may be unnecessary (in terms of fixing a non-existent problem), that doesn't necessarily make it useless, especially if it can improve performance or security, or reduce the maintenance effort.

I would use a database to synchronize your files. Have a database that points to the file locations. Put an entry into the database only when the files have been fully transferred. This would ensure that you are picking up completed files. You can poll the database to check if new entries are present instead of polling the file system. A very easy simple set up for a polling mechanism. If you would like to be told when a new file appears on the folder, then you would need to go in for a Message Queue.

Related

What is the right way to create/write a large file in java that are generated by a user?

I have looked at examples that tell best practices for file write/create operations but have not seen an example that takes into consideration my requirements. I have to create a class which reads the contents of 1 file, does some data transformation, and then write the transformed contents to a different file then sends the file to a web service. Both files ultimately can be quite large like up to 20 MB and also it is unpredictable when these files will be created because they are generated by the user. Therefore it could be like 2 minutes between the time when this process occurs or it could be several all in the same second. The system is not like crazy in the sense that it could be like hundreds of these operations in the same second but it could be several.
My instinct says to solve it by:
Creating a separate thread when the process begins.
Read the first file.
Do the data transformation.
Write the contents to the new file.
Send the file to the service.
Delete the created file.
Am I missing something? Is there a best practice to tackle this kind of issue?
The first question you should ask is weather you need to write the file to the disk in the first place. Even if you are supposed to send a file to a consumer at the end of your processing phase, you could keep the file contents in memory and send that. The consumer doesn't care weather the file is stored on disk or not, since it only receives an array of bytes with the file contents.
The only scenario in which it would make sense to store the file on disk would be if you would communicate between your processes via disk files (i.e. your producer writes a file to disk, sends some notification to your consumer and afterwards your consumer reads the file from disk - for example based on a file name it receives from the notification).
Regarding I/O best practices, make sure you use buffers to read (and potentially write) files. This could greatly reduce the memory overhead (since you would end up keeping only a chunk instead of the whole 20 MB file in memory at a given moment).
Regarding adding multiple threads, you should test weather that improves your application performance or not. If your application is already I/O intensive, adding multiple threads will result in adding even more contention on your I/O streams, which would result in a performance degradation.
Without the full details of the situation, a problem like this may be better solved with existing software such as Apache NiFi:
An easy to use, powerful, and reliable system to process and distribute data.
It's very good at picking up files, transforming them, and putting them somewhere else (and sending emails, and generating analytics, and...). NiFi is a very powerful tool, but may be overkill if you're needs are just a couple of files given the additional set-up.
Given the description you have given, I think you should perform the operations for each file on one thread; i.e. on thread will download the file, process it and then upload the results.
If you need parallelism, then implement the download / process / upload as a Runnable and submit the tasks to an ExecutorService with a bounded thread pool. And tune the size of the thread pool. (That's easy if you expose the thread pool size as a config property.)
Why this way?
It is simple. Minimal synchronization is required.
One of the three subtasks is likely to be your performance bottleneck. So by combining all three into a single task, you avoid the situation where the non-bottleneck tasks get too far ahead. And if you get too far ahead on some of the subtasks you risk running out of (local) disk space.
I'm going to contradict what Alex Rolea said about buffering. Yes, it may help. But in on a modern (e.g. Linux) operating system on a typical modern machine, memory <-> disk I/O is unlikely to be the main bottleneck. It is more likely that the bottleneck will be network I/O or server-side I/O performance (especially if the server is serving other clients at the same time.)
So, I would not prematurely tune the buffering. Get the system working, benchmark it, profile / analyze it, and based on those results figure out where the real bottlenecks are and how best to address them.
Part of the solution may be to not use disk at all. (I know you think you need to, but unless your server and its protocols are really strange, you should be able to stream the data to the server out of memory on the client side.)

java - File lastModified vs reading the file

I am using a file and need to update value in java when file is modified.
So, I am thinking to check modified time using lastModified of File class, and if modified read the file and update single property from the file.
My doubt is, is lastModified as heavy as reading single property from the file/reading whole file. Because my test results are showing almost same results.
So is it better to read file and update property from the file everytime or checking lastModified is better option in long run.
Note: This operation is performed every one minute.
Or is there any better option than polling lastModified to check if file has changed. I am using java 6.
Because you are using Java 6, checking the modified date or file contents is your only option (there's another answer that discusses using the newer java.nio.file functionality, and if you have the option of moving to Java 7, you should really, really consider that).
To answer your original question:
You didn't specify the location of the file (i.e. is it on a local disk or a server somewhere else) - I'll respond assuming local disk, but if the file is on a different machine, network latencies and netbios/dfs/whatever-network-file-system-you-use will exacerbate the differences.
Checking modified date on a file involves reading the meta data from disk. Checking the contents of the file require reading the file contents from disk (if the file is small, this will be one read operation. If the file is larger, it could be multiple read operations).
Reading the content of the file will probably involve read/write lock checking. Generally speaking, checking the modified date on the file will not require read/write lock checking (depending on the file system, there may still be consistency locks occurring on the meta data disk page, but those are generally lighter weight than file locks).
If the file changes frequently (i.e. you actually expect it to change every minute), then checking the modified date is just overhead - you are going to read the file contents in most cases anyway. If the file doesn't change frequently, then there would definitely be an advantage to modified date checking if the file was large (and you had to read the entire file to get at your information).
If the file is small, and doesn't change frequently, then it's pretty much a wash. In most cases, the file contents and the file meta data are already going to be paged into RAM - so both operations are a relatively efficient check of contents in RAM.
I personally would do the modified date check just b/c it logically makes sense (and it protects you from the performance hit if the file size ever grows above one disk page) - but if the file changes frequently, then I'd just read the file contents. But really, either way is fine.
And that brings us to the unsolicited advice: my guess is that the performance on this operation isn't a big deal in the greater scheme of things. Even if it took 1000X longer than it does now, it probably still wouldn't impact your application's primary purpose/performance. So my real advice here is just write the code and move on - don't worry about it's performance unless this becomes a bottleneck for your application.
Quoting from The JAVA Tutorials
To implement this functionality, called file change notification, a program must be able to detect what is happening to the relevant directory on the file system. One way to do so is to poll the file system looking for changes, but this approach is inefficient. It does not scale to applications that have hundreds of open files or directories to monitor.
The java.nio.file package provides a file change notification API, called the Watch Service API. This API enables you to register a directory (or directories) with the watch service. When registering, you tell the service which types of events you are interested in: file creation, file deletion, or file modification. When the service detects an event of interest, it is forwarded to the registered process. The registered process has a thread (or a pool of threads) dedicated to watching for any events it has registered for. When an event comes in, it is handled as needed.`
Here are some links which provide some sample source on implementation of this service:-
Link 1
Link 2
Edit:- Thanks to Kevin Day for pointing out in comments, since you are using java 6 this might not work for you. Although there is an alternative available in Apache Commons IO . But have not worked with it, so you have to check it yourself :)

Reading a file that is being written to - Locking it?

There is a file - stored on an external server which is updated very frequently by a vendor. My application polls this file every minute getting the values out. All I am doing is reading the file.
I am worried that by doing this I could inadvertently lock the file so it cant be written too by the vendor. Is this a possibility?
Kind regards
Further to Eric's answer - you could check the Last Modified Property of the temp file and only merge it with your 'working' file when it changes - that should protect you from read/write conflicts and only merge files just after the vendor has written to the temp. Though this is messy and mrab's comment is valid, a better solution should be found.
I have faced this problem several times, and as Peter Lawrey says there isn't any portable way to do this, and if your environment is Unix this should not be an issue at all as these concurrent access conditions are properly managed by the operating systems. However windows do not handle this at all (yes, that's the consequence of using an amateur OS for production work, lol).
Now that's said, there is a way to solve this if your vendor is flexible enough. They could write to a temp file and when finished move the temp file to the final destination. By doing this you avoid any concurrent access to the file between you and the vendor.
Another way is to precisely (difficult?) know the timing of your vendors update and avoid reading the file during some time frames. For instance if your vendor update the file every hour, avoid reading from five-to-the-hour to five-past-the-hour.
Hope it helps.
There is the Windows Shadow Copy service for volumes. This would allow to read the backup copy.
If the third party software is in java too, and uses a Logger, that should be tweakable: every minute writing to the next from 10 files or so.
I would try to relentlessly read the file (when modified since last read), till something goes wrong. Maybe you can make a test run with hundreds of reads in the weekend or at midnight, when no harm is done.
My answer:
Maybe you need a local watch program, a watch service for a directoryr, that waits till the file is modified, and then makes a fast cooy; after that allowing the copy to be transmitted.

Dumping a Java program into a file and restarting it

I was just wondering if it's possible to dump a running Java program into a file, and later on restart it (same machine)
It's sounds a bit weird, but who knows
--- update -------
Yes, this is the hibernate feature for a process instead of a full system. But google 'hibernate jvm process' and you'll understand my pain.
There is a question for linux on this subject (here). Quickly, it's possible to hibernate a process (far from 100% reliable) with CryoPID.
A similar question was raised in stackoverflow some years ago.
With a JVM my educated guess is that hibernating should be a lot easier, not always possible and not reliable at 100% (e.g. UI and files).
Serializing a persistent state of the application is an option but it is not an answer to the question.
This may me a bit overkill but one thing you can do is run something like VirtualBox and halt/save the machine.
There is also:
- JavaFlow from Apache that should do just that even though I haven't personally tried
it.
- Brakes that may be exactly what you're looking for
There are a lot restrictions any solution to your problem will have: all external connections might or might not survive your attempt to freeze and awake them. Think of timeouts on the other side, or even stopped communication partners - anything from a web server to a database or even local files.
You are asking for a generic solution, without any internal knowledge of your program, that you would like to hibernate. What you can always do, is serialize that part of the state of your program, that you need to restart your program. It is, or at least was common wisdom to implement restart point in long running computations (think of days or weeks). So, when you hit a bug in your program after it run for a week, you could fix the bug and save some computation days.
The state of a program could be surprisingly small, compared to the complete memory size used.
You asked "if it's possible to dump a running Java program into a file, and later on restart it." - Yes it is, but I would not suggest a generic and automatic solution that has to handle your program as a black box, but I suggest that you externalize the important part of your programs state and program restart points.
Hope that helps - even if it's more complicated than what you might have hoped for.
I believe what the OP is asking is what the Smalltalk guys have been doing for decades - store the whole programming/execution environment in an image file, and work on it.
AFAIK there is no way to do the same thing in Java.
There has been some research in "persisting" the execution state of the JVM and then move it to another JVM and start it again. Saw something demonstrated once but don't remember which one. Don't think it has been standardized in the JVM specs though...
Found the presentation/demo I was thinking about, it was at OOPSLA 2005 that they were talking about squawk
Good luck!
Other links of interest:
Merpati
Aglets
M-JavaMPI
How about using SpringBatch framework?
As far as I understood from your question you need some reliable and resumable java task, if so, I believe that Spring Batch will do the magic, because you can split your task (job) to several steps while each step (and also the entire job) has its own execution context persisted to a storage you choose to work with.
In case of crash you can recover by analyzing previous run of specific job and resume it from exact point where the failure occurred.
You can also pause and restart your job programmatically if the job was configured as restartable and the ExecutionContext for this job already exists.
Good luck!
I believe :
1- the only generic way is to implement serialization.
2- a good way to restore a running system is OS virtualization
3- now you are asking something like single process serialization.
The problem are IOs.
Says your process uses a temporary file which gets deleted by the system after
'hybernation', but your program does not know it. You will have an IOException
somewhere.
So word is , if the program is not designed to be interrupted at random , it won't work.
Thats a risky and unmaintable solution so i believe only 1,2 make sense.
I guess IDE supports debugging in such a way. It is not impossible, though i don't know how. May be you will get details if you contact some eclipse or netbeans contributer.
First off you need to design your app to use the Memento pattern or any other pattern that allows you to save state of your application. Observer pattern may also be a possibility. Once your code is structured in a way that saving state is possible, you can use Java serialization to actually write out all the objects etc to a file rather than putting it in a DB.
Just by 2 cents.
What you want is impossible from the very nature of computer architecture.
Every Java program gets compiled into Java intermediate code and this code is then interpreted into into native platform code (when run). The native code is quite different from what you see in Java files, because it depends on underlining platform and JVM version. Every platform has different instruction set, memory management, driver system, etc... So imagine that you hibernated your program on Windows and then run it on Linux, Mac or any other device with JRE, such as mobile phone, car, card reader, etc... All hell would break loose.
You solution is to serialize every important object into files and then close the program gracefully. When "unhibernating", you deserialize these instances from these files and your program can continue. The number of "important" instances can be quite small, you only need to save the "business data", everything else can be reconstructed from these data. You can use Hibernate or any other ORM framework to automatize this serialization on top of a SQL database.
Probably Terracotta can this: http://www.terracotta.org
I am not sure but they are supporting server failures. If all servers stop, the process should saved to disk and wait I think.
Otherwise you should refactor your application to hold state explicitly. For example, if you implement something like runnable and make it Serializable, you will be able to save it.

Java writing file on Linux which gets deleted but i can still write to it

I have a Java application which is writing files to disk. The issue is, Linux does not lock files as Windows does, so someone can delete the file as it is being written to. When this happens, my Java application keeps chugging along like the file still exists...even allows more writes, with no Exceptions.
I added a check for: file.exists(), however this kills my performance by almost 50%. Anyone have any clever ideas as to how i can work around this and keep my performance high?
It's funny to hear of this being considered a "problem" -- those of us who cut their teeth on UNIX think Windows approach to file locking is crude and painful.
If you can't use file permissions to (mostly) prevent this, I think File.exists() is the only solution here, but presumably you could call it less frequently if it's causing a performance problem -- maybe from a "reaper" thread that wakes up occasionally to check for this condition.
A "file" under unix is an unnamed i-node (which contains data) and a zero+ entries in directories pointing to that i-node. Zero or more. Which means you can delete the name, but the i-node will still exist, and if open, one can write into it and read from it.
But you don't need to check f.exists() at every write. Do it once in a while (let's say once in 15 seconds). Your performance won't hurt much.
If you don't mind reducing your programs portability you could use something like jnotify to be notified when the file is deleted.
This functionality will, I believe, be part of JDK 7, which means you can later remove the dependance on jnotify later on.
Consider writing the file with a temporary name and after write is complete you rename/move the file to it's final name/location.

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