Does the application server affect Java memory usage? - java

Let's say I have a very large Java application that's deployed on Tomcat. Over the course of a few weeks, the server will run out of memory, application performance is degraded, and the server needs a restart.
Obviously the application has some memory leaks that need to be fixed.
My question is.. If the application were deployed to a different server, would there be any change in memory utilization?

Certainly the services offered by the application server might vary in their memory utilization, and if the server includes its own unique VM -- i.e., if you're using J9 or JRockit with one server and Oracle's JVM with another -- there are bound to be differences. One relevant area that does matter is class loading: some app servers have better behavior than others with regard to administration. Warm-starting the application after a configuration change can result in serious memory leaks due to class loading problems on some server/VM combinations.
But none of these are really going to help you with an application that leaks. It's the program using the memory, not the server, so changing the server isn't going to affect much of anything.

There will probably be a slight difference in memory utilisation, but only in as much as the footprint differs between servlet containers. There is also a slight chance that you've encountered a memory leak with the container - but this is doubtful.
The most likely issue is that your application has a memory leak - in any case, the cause is more important than a quick fix - what would you do if the 'new' container just happens to last an extra week etc? Moving the problem rarely solves it...
You need to start analysing the applications heap memory, to locate the source of the problem. If your application is crashing with an OOME, you can add this to the JVM arguments.
-XX:-HeapDumpOnOutOfMemoryError
If the performance is just degrading until you restart the container manually, you should get into the routine of triggering periodic heap dumps. A timeline of dumps is often the most help, as you can see which object stores just grow over time.
To do this, you'll need a heap analysis tool:
JHat or IBM Heap Analyser or whatever your preference :)
Also see this question:
Recommendations for a heap analysis tool for Java?
Update:
And this may help (for obvious reasons):
How do I analyze a .hprof file?

Related

Using Java from Host to share Heapspace

Can mounting jre directory from host system reduce ram memory usage by sharing heapspace? Or will this cause some problems?
I have a lot of containers running java service inside. The problem is, that sometimes when the services have very strong workload, they need (eventually) a lot if heapspace. When i assign for each container (for example) -Xmx2g, then im pretty fast running out of RAM on my host system. Unfortunately once java allocated heap, it will not be free anymore (for the container RAM, host RAM). Restarting the container will free the allocated memory for the heapspace used in the peak, but for container with solr inside it will (probably) take several hours to index all the data again, what makes the downtime only possible on the weekend.
The idea is to using common jre in the host system to share the heapspace between single services. Probably i can assign -Xmx the following value (only an example): 250m times a number of services plus 3g for the workload peaks. This way i will using much less memory, because the services sharing the heap space.
Is there an error in my idea or can it really be worth?
Maybe someone is already faced such a problem and and probably solved it in another way?
I don't think it is a good idea to share memory between containers. Docker is designed to isolate different environments and reduce the effects from other containers. So run with their own jvm is the current way to use Docker and other containers.
Also if you shared memory, it is hard to migrate the container.
I already found a solution here (schrinking java heapspace): https://stackoverflow.com/a/4952645/2893873
I assumed that shrinking java heap space is not possible, but it is. I think it will be a better solution instead of sharing the JVM between the container.

Stable JVM but system memory increase

I am running a java application on a Ubuntu 16.04 server. After extensive investigation I have discovered that the JVM heap size is more or less constant. At any rate there are no memory increase.
However, when I look at the server using htop the memory consumption of the server grows at an alarming rate. I am not sure what exactly is causing this but its 100% originating from java process.
I have looked at the hprof files but I cant really tell what Im looking for.
I am running two libs that might be responsible but I am not intimately familiar with them;
OrientDB (plocal)
Hazelcast
Im not sure if either / both of these would cause a memory increase outside the JVM.
Any advice on the best plan to help identify the problem would be great.
Thanks to #the8472, #davmac #qwwdfsad and #andrey-lomakin for your comments. I appreciate the details provided in the question where very thin but I was trying to avoid providing unrelated data that might lead down a rabbit whole.
I systematically tested each suggestion and it turns out that the problem was originating from OrientDB. I cant say 100% which of the following fixed the problem (possibly both). As per #andrey-lomakin suggestion I upgraded from 2.1.19 to 2.2-rc1. In doing this the applications batch inserts started throwing exceptions so I converted them all into single linear queries. Once compete the memory leak has gone.
As a side note in case it affects anybody else while testing for direct IO leak I did discover to my suprise that -Djdk.nio.maxCachedBufferSize=... works withJava(TM) SE Runtime Environment (build 1.8.0_91-b14).

Access Memory Usage of JVM from within my Application?

I have a Grails/Spring application which runs in a servlet container on a web server like Tomcat. Sometime my app crashes because the JVM reaches its maximal allowed memory (Xmx).
The error which follows is a "java.lang.OutOfMemoryError" because Java heap space is full.
To prevent this error I want to check from within my app how much memory is in use and how much memory the current JVM has remaining.
How can I access these parameters from within my application?
Try to understand when OOM is thrown instead of trying to manipulate it through the application. And also, even if you are able to capture those values from within your application - how would you prevent the error? By calling GC explicitly. Know that,
Java machine specifications says that
OutOfMemoryError: The Java virtual machine implementation has run out of either virtual or physical memory, and the automatic storage manager was unable to reclaim enough memory to satisfy an object creation request.
Therefore, GC is guaranteed to run before a OOM is thrown. Your application is throwing an OOME after it has just run a full garbage collect, and discovered that it still doesn't have enough free heap to proceed.
This would be a memory leak or in general your application could have high memory requirement. Mostly if the OOM is thrown with in short span of starting the application - it is usually that application needs more memory, if your server runs fine for some time and then throw OOM then it is most likely a memory leak.
To discover the memory leak, use the tools mentioned by people above. I use new-relic to monitor my application and check the frequency of GC runs.
PS Scavenge aka minor-GC aka the parallel object collector runs for young generation only, and PS MarkAndSweep aka major GC aka parallel mark and sweep collector is for old generation. When both are run – its considered a full GC. Minor gc runs are pretty frequent – a Full GC is comparatively less frequent. Note the consumption of different heap spaces to analyze your application.
You can also try the following option -
If you get OOM too often, then start java with correct options, get a heap dump and analyze it with jhat or with memory analyzer from eclipse (http://www.eclipse.org/mat/)
-XX:+HeapDumpOnOutOfMemoryError -XX:HeapDumpPath=path to dump file
You can try the Grails Melody Plugin that display's the info in the url /monitoring relative to your context.
To prevent this error I want to check from within my app how much
memory is in use and how much memory the current JVM has remaining.
I think that it is not the best idea to proceed this way. Much better is to investigate what actually breaks your app and eliminate error or make some limitation there. There could be many different scenarios and your app can become unpredictable. So to sum up - capturing memory level for monitoring purpose is OK (but there are many dedicated tools for that) but in my opinion depending on these values in application logic is not recommended and bad practice
To do this you would use a profiler to profile your application and JVM, rather than having code to monitor such metrics inside your application.
Profiling is a form of dynamic program analysis that measures, for example, the space (memory) or time complexity of a program, the usage of particular instructions, or frequency and duration of function calls
Here are some good java profilers:
http://visualvm.java.net/ (Free)
http://www.ej-technologies.com/products/jprofiler/overview.html (Paid)

Grails application hogging too much memory

Tomcat 5.5.x and 6.0.x
Grails 1.6.x
Java 1.6.x
OS CentOS 5.x (64bit)
VPS Server with memory as 384M
JAVA_OPTS : tried many combinations- including the following
export JAVA_OPTS='-Xms128M -Xmx512M -XX:MaxPermSize=1024m'
export JAVA_OPTS='-server -Xms128M -Xmx128M -XX:MaxPermSize=256M'
(As advised by http://www.grails.org/Deployment)
I have created a blank Grails application i.e simply by giving the command grails create-app and then WARed it
I am running Tomcat on a VPS Server
When I simply start the Tomcat server, with no apps deployed, the free memory is about 236M
and used memory is about 156M
When I deploy my "blank" application, the memory consumption spikes to 360M and finally the Tomcat instance is killed as soon as it takes up all free memory
As you have seen, my app is as light as it can be.
Not sure why the memory consumption is as high it is.
I am actually troubleshooting a real application, but have narrowed down to this scenario which is easier to share and explain.
UPDATE
I tested the same "blank" application on my local Tomcat 5.5.x on Windows and it worked fine
The memory consumption of the Java process shot from 32 M to 107M. But it did not crash and it remained under acceptable limits
So the hunt for answer continues... I wonder if something is wrong about my Linux box. Not sure what though...
UPDATE 2
Also see this http://www.grails.org/Grails+Test+On+Virtual+Server
It confirms my belief that my simple-blank app should work on my configuration.
It is a false economy to try to run a long running Java-based application in the minimal possible memory. The garbage collector, and hence the application will run much more efficiently if it has plenty of regular heap memory. Give an application too little heap and it will spend too much time garbage collecting.
(This may seem a bit counter-intuitive, but trust me: the effect is predictable in theory and observable in practice.)
EDIT
In practical terms, I'd suggest the following approach:
Start by running Tomcat + Grails with as much memory as you can possibly give it so that you have something that runs. (Set the permgen size to the default ... unless you have clear evidence that Tomcat + Grails are exhausting permgen.)
Run the app for a bit to get it to a steady state and figure out what its average working set is. You should be able to figure that out from a memory profiler, or by examining the GC logging.
Then set the Java heap size to be (say) twice the measured working set size or more. (This is the point I was trying to make above.)
Actually, there is another possible cause for your problems. Even though you are telling Java to use heaps of a given size, it may be that it is unable to do this. When the JVM requests memory from the OS, there are a couple of situations where the OS will refuse.
If the machine (real or virtual) that you are running the OS does not have any more unallocated "real" memory, and the OS's swap space is fully allocated, it will have to refuse requests for more memory.
It is also possible (though unlikely) that per-process memory limits are in force. That would cause the OS to refuse requests beyond that limit.
Finally, note that Java uses more virtual memory that can be accounted for by simply adding the stack, heap and permgen numbers together. There is the memory used by the executable + DLLs, memory used for I/O buffers, and possibly other stuff.
384MB is pretty small. I'm running a small Grails app in a 512MB VPS at enjoyvps.net (not affiliated in any way, just a happy customer) and it's been running for months at just under 200MB. I'm running a 32-bit Linux and JDK though, no sense wasting all that memory in 64-bit pointers if you don't have access to much memory anyway.
Can you try deploying a tomcat monitoring webapp e.g. psiprobe and see where the memory is being used?

Analyze Tomcat Heap in detail on a production System

Having analyzed a light-load web application running in tomcat, using JMX Console, it turns out the "PS Old Gen" is growing slowly but constant. It starts with 200MB and grows around 80MB/Hour.
CPU is not an issue, it runs at 0-1% on average, but somewhere it leaks memory, so it will become unstable some days after deployment.
How do i find out what objects are allocated on the heap? Are there any good tutorials or tools you know?
You could try jmap, one of the JDK Development Tools. You can use jhat with the output to walk heap dumps using your web browser.
See this answer for a short explanation.
This comes up quite often, so searching SO for those tools should turn up some alternatives.
I've used the HeapAnalyzer tool from IBM's alphaWorks with good success. It takes output from Java's heap profile, hprof, and analyzes it to show you the most likely memory leaks.
You can use NetBeans profiler. It has 2 modes, launching tomcat profiled directly from ide (for localhost) or using a remote profiling with a JAR provided and some run config on server.
I used it in a project for a memory leak and it was useful.
See my answer here:
Strategies for the diagnosis of Java memory issues
And there are also tips here:
How can I figure out what is holding on to unfreed objects?
What you are seeing is normal, unless you can prove otherwise.
You do not need to analyze the heap when the additional "consumed space" disappears when a GC in the old space happens.
At some point, when the used space reaches your maximum heap size you will observe a pause caused by the default GC you use and afterwards the used memory should go down a lot. Only if it does not go down after a GC you might be interested what is still holding onto those objects.
JRockit Mission Control can analyze memory leaks while connected to JVM. No need to take snapshots all the time. This can be useful if you have a server with a large heap.
Just hook the tool up to the JVM and it will give you a trend table where you can see which type of objects that are growing the most, and then you can explore references to those objects. You can also get allocations traces, while the JVM is running, so you can see where in the application the objects are allocated.
You can download it here for free

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