I'm just curious. The man page for kill says that QUIT, aka signal # 3, is a "core" signal. It seems that all it does, for Java processes, is dump the thread information. So, is the QUIT as misnomer? Is it just that the JVM implements a singal 3 handler that dumps threads?
QUIT is arguably a misnomer for Java. But by that argument any signal name could be a misnomer if an application is allowed to change the default behaviour of the signal's handler.
In reality, the correspondence between UNIX signal names and what they actually do has always been a bit vague and tenuous. However, developers have been dealing with this "issue" for 30+ years without it being a real problem.
And yes, the Java thread stack dump behaviour is implemented by the JVM. The default UNIX / LINUX behaviour is to create a memory dump of the process, unless this is inhibited by other factors.
Yea, the JVM captures the #3 signal to dump threads. By default, for a normal unix process, it dumps core (i.e. take a memory snapshot of the process and write it to a file) and exits.
For Java, that isn't very helpful, so it does a thread dump instead.
Related
How do I distinguish running Java threads and native threads?
In Linux there will be Parent process for every child process, and they say 0 is the parent of all the process, will there be a Parent thread of all the forked Java threads?
How do I know which Java thread is related to OS thread (if a Java thread forkes a native process thread).
Is there any naming convention of Java threads and OS threads?
Can a running Java threads can be suspended or killed from another Java code?
On Linux, Java threads are implemented with native threads, so a Java program using threads is no different from a native program using threads. A "Java thread" is just a thread belonging to a JVM process.
On a modern Linux system (one using NPTL), all threads belonging to a process have the same process ID and parent process ID, but different thread IDs. You can see these IDs by running ps -eLf. The PID column is the process ID, the PPID column is the parent process ID, and the LWP column is the thread (LightWeight Process) ID. The "main" thread has a thread ID that's the same as the process ID, and additional threads will have different thread ID values.
Older Linux systems may use the "linuxthreads" threading implementation, which is not fully POSIX-compliant, instead of NPTL. On a linuxthreads system, threads have different process IDs.
You can check whether your system is using NPTL or linuxthreads by running the system's C library (libc) as a standalone program and looking under "Available extensions" in its output. It should mention either "Native POSIX Threads Library" or linuxthreads. The path to the C library varies from system to system: it may be /lib/libc.so.6, /lib64/libc.so.6 (on 64-bit RedHat-based systems), or something like /lib/x86_64-linux-gnu/libc.so.6 (on modern Debian-based systems such as Ubuntu).
At the OS level, theads don't have names; those exist only within the JVM.
The pthread_kill() C function can be used to send a signal to a specific thread, which you could use to try to kill that specific thread from outside the JVM, but I don't know how the JVM would respond to it. It might just kill the whole JVM.
There is no standard; this completely depends on the Java implementation which you're using. Also, don't mix up "native threads" and "native processes". A process is an isolated entity which can't see into the address space of other processes. A thread is something which runs in the address space of a native process and which can see into the memory of other threads of the same process.
What you see on Linux is something else: Some versions of Linux create an entry in the process table for each thread of a parent process. These "processes" aren't real processes (in the isolation sense). They are threads which can be listed with the ps command. You can find the process which created them by using the parent PID (PPID).
There is no generic solution how Java threads are mapped to OS threads, if at all. Every JVM implementation can do it in a different way.
There is also a pure Java thread implementation, called green threads. This is used as a fallback if native threads aren't supported or the system isn't multithreaded at all. You won't see any green threads at your OS.
Can a running Java threads can be suspended or killed from another Java code ?
If they are running at the same JVM, yes, with stop(). But that's not a good solution and may work, or not. interrupt() allows the thread so safely shut itself down.
There is no way to kill threads outside of the JVM I know of. If a OS really supports killing of threads, I wouldn't expect the Java application to run correctly afterwards!
Can a running Java threads can be
suspended or killed from another Java
code ?
In theory yes. In practice, the Thread.kill() and Thread.suspend() methods are deprecated because they are unsafe except in very limited situations. The basic problem is that killing or suspending a Java thread is likely to mess up other threads that depend on it, and shared data structures that it might have been in the middle of updating.
If "another Java code" is meant to mean another JVM, then the chances of it working are even less. Even if you figured out how to send the relevant thread signal, the results are completely unpredictable. My bet is that the "target" JVM would crash.
Running kill -QUIT on a Unix system will trigger a thread dump. I know this because I have done this hundreds of times.
However, another developer tells me he has seen this "crash the JVM" and using twiddle or the JMX API is "safer".
I'm struggling to find any references online to kill -QUIT behaving this way.
Can anyone confirm that it could actually kill the java process/cause the JVM to quit?
(Obviously one way for it to do this would if someone didn't correctly type "-QUIT" :-))
In 12 years I have never seen kill -QUIT crash a JVM. But as Disco 3 says, if you're doing a thread dump while the JVM is in distress (which is when you usually do thread dumps), it may (possibly?) crash with an OutOfMemoryError. But anything could crash a JVM in that situation. I wouldn't hesitate to use kill -QUIT, but you may find jstack more useful because it will dump the thread dump to your stdout rather than the JVM's.
It is possible to kill a thread that is in state RUNNING in a non programatically way?
I know that top command in *nix can show threads. Can I kill the thread in the OS?
I'd like to know if there is a way to link a thread to a process so I can kill only that specific thread and not the application.
We had a bug in our code that kept a thread in state RUNNING in a synchronized method. The thread kept the lock on the object "hanging" the application.
The bug is fixed. But I wonder if is possible.
The short answer is "maybe, but you should not and most of the time it won't work either".
The long answer is:
"Maybe..."
Some JVM implementation map java threads to OS threads and some do not. If the JVM does a mapping to a native OS thread, you might be able to kill that thread with some process tool that the OS provides (like kill on *nix). If the JVM does green threads, meaning it doesn't map a Java thread to an OS level thread, then you are basically out of luck using OS level tools. Luckily only very few JVM implementations do this. An approach that can be used regardless in which way the JVM organizes it's threads, is using the java debugger. This article describes the procedure of doing it: http://www.rhcedan.com/2010/06/22/killing-a-java-thread/.
"but you should not do it"
Killing a thread on the OS level will almost certainly leave the JVM in an undefined state (read "jvm might crash or delete all files on your disk or do whatever it fricking pleases to do"). Even when going the debugger way, only a very small amount of java applications (read "no application made on this planet") will properly handle the event that an outside application is killing one of it's threads. As a result these applications will be put in an undefined state (read "application might crash or delete all files on your disk or do whatever it fricking pleases to do").
"and most of the time it won't work either"
If the thread is really stuck with some blocked IO etc, then killing the thread won't work, it will just not respond. If a program is stuck it's probably better to kill the whole program, find the issue with the program and fix it instead of killing a single thread.
For all your doubts on killing a thread, refer this:
http://download.oracle.com/javase/1.4.2/docs/guide/misc/threadPrimitiveDeprecation.html
On linux, there is a tkill(int tid, int sig) command, similar to kill.
On windows, ProcessExplorer can do it from gui, don't know if there is anything with cli.
I want to exit a java process and free all the resources before it finishes its normal running, if a certain condition is meet. I dont however want to quit JVM, as I have other java programs running at the same time. Does return; do the above, or is there a better way to do it?
Thanks.
There is one JVM process per running Java application. If you exit that application, the process's JVM gets shut down. However, this does not affect other Java processes.
You need to understand the JVM mechanism and clarify the terminology.
Let's use the following as datum for the terminology.
Threads are divisions of concurrently processed flows within a process.
A process is an OS level thread. The OS manages the processes. A process is terminated by sending a termination signal to the OS management. The signal may be sent by the process itself or by another process that has the applicable privilege.
Within a process, you can create process level threads. Process level threads are normally facilitated by the process management of the OS, but they are initiated by the process and terminated by the process. Therefore, process level threads are not the same as processes.
An application is a collection of systems, programs and/or threads that cooperate in various forms. A program or process within an application may terminate without terminating the whole application.
Within the context of JVM terminology, program may be one of the following.
A program is run per JVM process. Each program consumes one JVM process and is invoked by supplying the classpath of java bytecode and specifying the main entry point found in the classpath. When you terminate a java program, the whole jvm process that ran that program also terminates.
A program is run per process level thread. For example, an application run within a tomcat or JEE server is run as a thread within the JEE process. The JEE process is itself a program consuming one JVM process. When you terminate an application program, the JEE process does not terminate.
You may initiate process level threads within a java program. You may write code that terminates a thread but that would not terminate the process (unless it is the last and only running thread in the process). The JVM garbage collection would take care of freeing of resources and you do not need to free resources yourself after a process level thread is terminated.
The above response is simplified for comprehension. Please read up on OS design and threading to facilitate a better understanding of processes and the JVM mechanism.
If the other threads running concurrently are not daemon threads, leaving main will not terminate the VM. The other threads will continue running.
I completely missed the point though.
If you start each program in a separate JVM, calling System.exit() in one of them will not influence the others, they're entirely different processes.
If you're starting them through a single script or something, depending on how it is written, something else could be killing the other processes. Without precise information about how you start these apps, there's really no telling what is going on.
#aix's answer is probably apropos to your question. Each time you run the java command (or the equivalent) you get a different JVM instance. Calling System.exit() in one JVM instance won't cause other JVM instances to exit. (Try it and see!)
It is possible to create a framework in which you do run multiple programs within the same JVM. Indeed this is effectively what you do when you run a "bean shell". The same sort of thing happens when your "programs" are services (or webapps, or whatever you call them) running in some application server framework.
The bad news is that if you do this kind of thing, there is no entirely reliable way make an individual "program" go away. In particular, if the program is not designed to be cooperative (e.g. if it doesn't check for interrupts), you will have to resort to the DEPRECATED Thread.stop() method and friends. And those methods can have nasty consequences for the JVM and the other programs running in it.
In theory, the solution to that problem is to use Isolates. Unfortunately, I don't think that any mainstream JVMs support Isolates.
Some common usecases leading these kind of requirements can be solved through tools like Nailgun, or Drip.
Nailgun allows you to run what appears to be multiple independent executions of a commandline program, but they all happen in the same JVM. Therefore repeated JVM start-up time does not have to be endured. If these execution interact with global state, then the JVM will get polluted in time and things start to break up.
Drip will use a new JVM for each execution, but it always keeps a precreated JVM with the correct classpath and options ready. This is less performant, but it can guarantee correctness through isolation.
I am running a Java process with Xmx2000m, the host OS is linux centos, jdk 1.6 update 22. Lately I have been experiencing a weird behavior in the process, it becomes totally unresponsive with no apparent reason, no logs, no errors, nothing.. I am using jconsole to monitor the processor, heap and Perm memory are not full, threads and loaded classes are not leaking..
Explanation anyone?
I doubt anyone can give you an explanation since there are lots of possible reasons and not nearly enough information. However, I suggest that you jstack the process once it's hung to figure out what the threads are doing, and take it from there. It sounds like a deadlock or thrashing of some sort.
Do a thread dump. If you have access to the foreground process on Linux, use ctrl-\. Or use jstack to dump stack remotely. Or you can actually poke it through JMX via jconsole at MBeans/java.lang/Threading/Operations/dumpAllThreads.
Without knowing more about your app, it's hard to speculate about the cause. Presumably your threads are either a) blocked or b) exited. If they are blocked, they could be waiting for I/O on a database or other operation OR they could be waiting on a lock or monitor (deadlocked). If a deadlock exists, the thread dump will tell you which threads are deadlocked, which lock, and (in Java 6) annotate the stack with where locks have been taken. You can also search for deadlocks with the JMX method, available through jconsole at MBeans/java.lang/Threading/Operations/find[Monitor]DeadlockedThreads().
Or your threads may have received unhandled exceptions and exited. Check out Thread's uncaughtExceptionHandlers or (better) use Executors in java.util.concurrent.
And finally, the other classic source of pauses in Java is GC. Run with -verbose:gc and other GC flags to see if it's doing a full GC collection. You can also turn this on dynamically in jconsole by flipping the flag at MBeans/java.lang/Memory/Attributes/Verbose.
Agree with aix, but would like to add a couple of recommendataions.
1. check your system. Run top to see whether the system itself is healthy, CPU is not 100% and memory is available. If not, fix this.
2. application may freeze as a result of dead lock. Check this.
Ok here are some updates I wanted to share:
There is an incompatability between NTPL (Linux’s new thread library) and the Java 1.6+ JVM. A random bug causes the JVM to hang and eat up 100% CPU.
To work around it set LD_ASSUME_KERNEL=2.4.1 before running the JVM, export LD_ASSUME_KERMEL=2.4.1 . This disables NTPL: problem solved!
But for compatibility reasons, I'm still looking for a solution that uses NTPL.
Threads can be traced using jvisualvm and jconsole, and deadlocks can be avoided too. Note that there are several network services each with separate thread pools, and they all become unreachable.
Check the jvisualvm of the process right before the crash.
http://www.jadyounan.com/wp-content/uploads/2010/12/process.png
Could you elaborate more on what you are doing ? 2000 for memory is rather a lot.