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How do I add Serialize object in to objectOutputStream? [duplicate]

I have this exception and I don't understand why it would be thrown or, how I should handle it.
try {
os.writeObject(element);
} catch (IOException e) {
e.printStackTrace();
}
Where element is a TransformGroup containing some other TransformGroups an instance of the class Atom:
public class Atom extends Group implements Serializable{
float pozX,pozY;
Group group= new Group();
Color3f blue = new Color3f(new Color(255));
Color3f black = new Color3f(new Color(0));
Sphere AtSph=new Sphere();
public Atom(final float WEIGHT, final int BOUNDS,final float radius,Color3f color)
{
AppSetting ap= new AppSetting(color, black);
AtSph=new Sphere(radius,1,100,ap);
}
}
The full error log:
java.io.NotSerializableException: javax.media.j3d.TransformGroup
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.writeObject(Unknown Source)
at cls.MolecularBuilder.addAtom(MolecularBuilder.java:511)
at cls.MolecularBuilder$Console.HidrogenItemActionPerformed(MolecularBuilder.java:897)
at cls.MolecularBuilder$Console$2.actionPerformed(MolecularBuilder.java:746)
at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
at javax.swing.AbstractButton.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown Source)
at java.awt.Component.processMouseEvent(Unknown Source)
at javax.swing.JComponent.processMouseEvent(Unknown Source)
at java.awt.Component.processEvent(Unknown Source)
at java.awt.Container.processEvent(Unknown Source)
at java.awt.Component.dispatchEventImpl(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Window.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
at java.awt.EventQueue.access$200(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
AppSetting (in Atom class) is just a custom class that extends Appearance.

The fields of your object have in turn their fields, some of which do not implement Serializable. In your case the offending class is TransformGroup. How to solve it?
if the class is yours, make it Serializable
if the class is 3rd party, but you don't need it in the serialized form, mark the field as transient
if you need its data and it's third party, consider other means of serialization, like JSON, XML, BSON, MessagePack, etc. where you can get 3rd party objects serialized without modifying their definitions.

java.io.NotSerializableException can occur when you serialize an inner class instance because:
serializing such an inner class instance will result in serialization
of its associated outer class instance as well
Serialization of inner classes (i.e., nested classes that are not
static member classes), including local and anonymous classes, is
strongly discouraged
Ref: The Serializable Interface

Make the class serializable by implementing the interface java.io.Serializable.
java.io.Serializable - Marker Interface which does not have any methods in it.
Purpose of Marker Interface - to tell the ObjectOutputStream that this object is a serializable object.

As mentioned above if the class is a 3rd party class you need to convert it to a JSON/XML/BSON object as the 3rd party class object cannot be serialized.
I was working on my project and had the same issue and i used gson library to convert my class object to a JSON String. Afterwhich i used this String in that object and passed it through ObjectOutputStream object.
And over the client side i used the same to revert the JSON String back to the 3rd party class object.
You can download the jar from over here : https://jar-download.com/artifacts/com.google.code.gson/gson/2.8.2/source-code!
Here's how i did it :
// Method that returns String through a Object as a parameter i.e to be converted
public static String generateJSONStringFromObject(ThirdPartyClass object) throws JsonProcessingException{
ObjectMapper mapper = new ObjectMapper();
mapper.setVisibility(PropertyAccessor.FIELD, Visibility.ANY);
String jsonString = mapper.writeValueAsString(object);
return jsonString;
}
// Method that returns Object through a String as a parameter
public static ThirdPartyClass generateObjectFromJSONString(String jsonString){
Gson gson = new Gson();
ThirdPartyClass thirdPartyClassObject = gson.fromJson(jsonString, ThirdPartyClass.class);
return thirdPartyClassObject;
}

Hazelcast, HazelcastSerializationException: Failed to serialize 'com.hazelcast.spi.impl.operationservice.impl.operations.Backup'

I have created custom entry processor for updating map entries by extending AbstractEntryProcessor.
When my app is running in a cluster on two instances, and the entry processor is executed I receive following exception:
com.hazelcast.nio.serialization.HazelcastSerializationException: Failed to serialize 'com.hazelcast.spi.impl.operationservice.impl.operations.Backup'
at com.hazelcast.internal.serialization.impl.SerializationUtil.handleSerializeException(SerializationUtil.java:73)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.toBytes(AbstractSerializationService.java:143)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.toBytes(AbstractSerializationService.java:124)
at com.hazelcast.spi.impl.operationservice.impl.OperationServiceImpl.send(OperationServiceImpl.java:406)
at com.hazelcast.spi.impl.operationservice.impl.OperationBackupHandler.sendSingleBackup(OperationBackupHandler.java:187)
at com.hazelcast.spi.impl.operationservice.impl.OperationBackupHandler.makeBackups(OperationBackupHandler.java:159)
at com.hazelcast.spi.impl.operationservice.impl.OperationBackupHandler.backup(OperationBackupHandler.java:78)
at com.hazelcast.spi.impl.operationservice.impl.OperationRunnerImpl.sendBackup(OperationRunnerImpl.java:270)
at com.hazelcast.spi.impl.operationservice.impl.OperationRunnerImpl.handleResponse(OperationRunnerImpl.java:253)
at com.hazelcast.spi.impl.operationservice.impl.OperationRunnerImpl.run(OperationRunnerImpl.java:182)
at com.hazelcast.spi.impl.operationexecutor.impl.OperationThread.process(OperationThread.java:122)
at com.hazelcast.spi.impl.operationexecutor.impl.OperationThread.run(OperationThread.java:102)
Caused by: com.hazelcast.nio.serialization.HazelcastSerializationException: Failed to serialize 'com.hazelcast.map.impl.operation.PartitionWideEntryWithPredicateBackupOperation'
at com.hazelcast.internal.serialization.impl.SerializationUtil.handleSerializeException(SerializationUtil.java:73)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.writeObject(AbstractSerializationService.java:201)
at com.hazelcast.internal.serialization.impl.ByteArrayObjectDataOutput.writeObject(ByteArrayObjectDataOutput.java:371)
at com.hazelcast.spi.impl.operationservice.impl.operations.Backup.writeInternal(Backup.java:222)
at com.hazelcast.spi.Operation.writeData(Operation.java:472)
at com.hazelcast.internal.serialization.impl.DataSerializableSerializer.write(DataSerializableSerializer.java:161)
at com.hazelcast.internal.serialization.impl.DataSerializableSerializer.write(DataSerializableSerializer.java:52)
at com.hazelcast.internal.serialization.impl.StreamSerializerAdapter.write(StreamSerializerAdapter.java:41)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.toBytes(AbstractSerializationService.java:140)
... 10 common frames omitted
Caused by: com.hazelcast.nio.serialization.HazelcastSerializationException: Failed to serialize 'com.hazelcast.map.AbstractEntryProcessor$EntryBackupProcessorImpl'
at com.hazelcast.internal.serialization.impl.SerializationUtil.handleSerializeException(SerializationUtil.java:73)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.writeObject(AbstractSerializationService.java:201)
at com.hazelcast.internal.serialization.impl.ByteArrayObjectDataOutput.writeObject(ByteArrayObjectDataOutput.java:371)
at com.hazelcast.map.impl.operation.PartitionWideEntryBackupOperation.writeInternal(PartitionWideEntryBackupOperation.java:98)
at com.hazelcast.map.impl.operation.PartitionWideEntryWithPredicateBackupOperation.writeInternal(PartitionWideEntryWithPredicateBackupOperation.java:51)
at com.hazelcast.spi.Operation.writeData(Operation.java:472)
at com.hazelcast.internal.serialization.impl.DataSerializableSerializer.write(DataSerializableSerializer.java:161)
at com.hazelcast.internal.serialization.impl.DataSerializableSerializer.write(DataSerializableSerializer.java:52)
at com.hazelcast.internal.serialization.impl.StreamSerializerAdapter.write(StreamSerializerAdapter.java:41)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.writeObject(AbstractSerializationService.java:199)
... 17 common frames omitted
Caused by: java.util.ConcurrentModificationException: null
at java.util.ArrayList.writeObject(Unknown Source)
at sun.reflect.GeneratedMethodAccessor143.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)
at java.io.ObjectOutputStream.writeSerialData(Unknown Source)
at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.defaultWriteFields(Unknown Source)
at java.io.ObjectOutputStream.writeSerialData(Unknown Source)
at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.writeObject(Unknown Source)
at java.util.ArrayList.writeObject(Unknown Source)
at sun.reflect.GeneratedMethodAccessor143.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at java.io.ObjectStreamClass.invokeWriteObject(Unknown Source)
at java.io.ObjectOutputStream.writeSerialData(Unknown Source)
at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.defaultWriteFields(Unknown Source)
at java.io.ObjectOutputStream.writeSerialData(Unknown Source)
at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.defaultWriteFields(Unknown Source)
at java.io.ObjectOutputStream.writeSerialData(Unknown Source)
at java.io.ObjectOutputStream.writeOrdinaryObject(Unknown Source)
at java.io.ObjectOutputStream.writeObject0(Unknown Source)
at java.io.ObjectOutputStream.writeObject(Unknown Source)
at com.hazelcast.internal.serialization.impl.JavaDefaultSerializers$JavaSerializer.write(JavaDefaultSerializers.java:242)
at com.hazelcast.internal.serialization.impl.StreamSerializerAdapter.write(StreamSerializerAdapter.java:41)
at com.hazelcast.internal.serialization.impl.AbstractSerializationService.writeObject(AbstractSerializationService.java:199)
... 25 common frames omitted
My entry processor is look like this:
public class HRUpdateRacesWithEntriesProcessor extends AbstractEntryProcessor<HRMeeting.HRMeetingKey, HRMeeting> {
private List<HRRace> races;
private Date date;
public HRUpdateRacesWithEntriesProcessor(List<HRRace> races, Date date) {
this.races = races;
this.date = date;
}
#Override
public Object process(Map.Entry<HRMeeting.HRMeetingKey, HRMeeting> entry) {
HRMeeting meeting = entry.getValue();
races.stream()
.filter(race -> entry.getKey().equals(new HRMeeting.HRMeetingKey(race.getMeetingDate(), race.getCourseId())))
.forEach(newRace -> {
Optional<HRRace> matchedRace =
meeting.getRaces().stream().filter(origin -> origin.getKey().equals(newRace.getKey())).findFirst();
if (newRace.getEntries() != null && matchedRace.isPresent()) {
newRace.setUpdateDate(date);
newRace.getEntries().stream()
.filter(hrEntry -> matchedRace.get().getEntries().stream().map(el -> el.getKey())
.collect(Collectors.toList()).contains(hrEntry.getKey()))
.forEach(hrEntry -> hrEntry.setUpdateDate(date));
matchedRace.get().getEntries().retainAll(newRace.getEntries());
newRace.getEntries().addAll(matchedRace.get().getEntries());
}
meeting.getRaces()
.removeIf(hrRace -> matchedRace.isPresent() && matchedRace.get().getKey().equals(hrRace.getKey()));
meeting.getRaces().add(newRace);
});
entry.setValue(meeting);
return null;
}
}
For serialization my entites implements java Serializible. Is is can be reason of the issue?
I am using hazelcast-3.8-SNAPSHOT
Please, help me to solve it.

It might be a simple problem. I met the same error when tried to put an Object to IMap in Hazelcast. In my case, the object, which I try to put, wasn't implements Serializable.
So, I think you should check you did implements Serializable in "com.hazelcast.spi.impl.operationservice.impl.operations.Backup" like
public class Backup implements Serializable {
...
}

I think your problem is that somehow (it actually hard to follow the stream flow) capture content from your EntryProcessor implementation and because of that it is tried to be serialized using Serializable. Anyhow DataSerializable / IdentifiedDataSerializable is not java.util.Serializable to prevent unexpected serialization (like in your case) from happening :)
My guess is the date:
.forEach(hrEntry -> hrEntry.setUpdateDate(date));
I hope this helps, you might have to look for the actually captured value.

JavaFX Reading from file throws "InvocationTargetException"?

I've been trying to understand what the issue is exactly, but whatever I do doesn't seem to work.
I have a text file that lists names along with numbers, seperated by a colon.
An example of this is:
Betty Ross:52
Angie Scotts:29
Michael Rosen:72
The list is very long and comprises over 10,000 lines.
public class PeopleIds {
public static int UNDEFINED_ID = -1;
private static HashMap<String, Integer> people;
public static void initialize() {
people = new HashMap<String, Integer>();
System.out.println(new File("res/ids/people_ids.txt").exists());
try {
Files.lines(Paths.get("res/ids/people_ids.txt")).forEach(s -> {
people.put(s.replaceAll(":.*", "").trim(), Integer.parseInt(s.replaceAll(".*:", "")));
});
} catch (IOException e) {
System.out.println("Unable to read specified file.");
e.printStackTrace();
}
}
public static int getId(final String name) {
final Integer id = people.get(name);
return id != null ? id : UNDEFINED_ID;
}
}
I call the initialize method from a GUIController class:
public class GUIController implements Initializable {
#FXML
private TableView<PersonData> personTable;
#FXML
private TableColumn<PersonData, String> name;
#FXML
private TableColumn<PersonData, Integer> limit;
#FXML
private TextField searchInput;
#FXML
private ImageView personIcon;
private Image undefinedIcon;
private PersonIcon icon;
private ObservableList<PersonData> data;
#Override
public void initialize(URL location, ResourceBundle resources) {
PeopleIds.initialize();
undefinedIcon = new Image(getClass().getResourceAsStream("/ids/no.png"));
name.setCellValueFactory(new PropertyValueFactory<PersonData, String>("name"));
limit.setCellValueFactory(new PropertyValueFactory<PersonData, Integer>("limit"));
data = PriceData.getData();
personTable.setPeople(data);
searchInput.textProperty().addListener((ov, oldValue, newValue) -> {
final String input = searchInput.getText();
if (input.length() == 0) return;
searchInput.setText(input.substring(0, 1).toUpperCase() + input.substring(1).toLowerCase());
filterSearch();
});
}
}
When I call it from this class with PeopleIds.initialize(), an exception is thrown, telling me that there was an exception in the application start method.
Here is what was logged in its entirety:
Exception in Application start method
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at com.sun.javafx.application.LauncherImpl.launchApplicationWithArgs(Unknown Source)
at com.sun.javafx.application.LauncherImpl.launchApplication(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.lang.reflect.Method.invoke(Unknown Source)
at sun.launcher.LauncherHelper$FXHelper.main(Unknown Source)
Caused by: java.lang.RuntimeException: Exception in Application start method
at com.sun.javafx.application.LauncherImpl.launchApplication1(Unknown Source)
at com.sun.javafx.application.LauncherImpl.lambda$launchApplication$156(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Caused by: javafx.fxml.LoadException:
/C:/Confidential/bin/base/PersonGUI.fxml
at javafx.fxml.FXMLLoader.constructLoadException(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.loadImpl(Unknown Source)
at javafx.fxml.FXMLLoader.load(Unknown Source)
at base.PersonGUI.start(PersonGUI.java:13)
at com.sun.javafx.application.LauncherImpl.lambda$launchApplication1$163(Unknown Source)
at com.sun.javafx.application.PlatformImpl.lambda$runAndWait$176(Unknown Source)
at com.sun.javafx.application.PlatformImpl.lambda$null$174(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at com.sun.javafx.application.PlatformImpl.lambda$runLater$175(Unknown Source)
at com.sun.glass.ui.InvokeLaterDispatcher$Future.run(Unknown Source)
at com.sun.glass.ui.win.WinApplication._runLoop(Native Method)
at com.sun.glass.ui.win.WinApplication.lambda$null$149(Unknown Source)
... 1 more
Caused by: java.io.UncheckedIOException: java.nio.charset.MalformedInputException: Input length = 1
at java.io.BufferedReader$1.hasNext(Unknown Source)
at java.util.Iterator.forEachRemaining(Unknown Source)
at java.util.Spliterators$IteratorSpliterator.forEachRemaining(Unknown Source)
at java.util.stream.ReferencePipeline$Head.forEach(Unknown Source)
at base.PeopleIds.initialize(PeopleIds.java:17)
at base.GUIController.initialize(GUIController.java:36)
... 18 more
Caused by: java.nio.charset.MalformedInputException: Input length = 1
at java.nio.charset.CoderResult.throwException(Unknown Source)
at sun.nio.cs.StreamDecoder.implRead(Unknown Source)
at sun.nio.cs.StreamDecoder.read(Unknown Source)
at java.io.InputStreamReader.read(Unknown Source)
at java.io.BufferedReader.fill(Unknown Source)
at java.io.BufferedReader.readLine(Unknown Source)
at java.io.BufferedReader.readLine(Unknown Source)
... 24 more
Exception running application base.PersonGUI
I'm not sure what is going on here? I've looked into it and people have said to move the fxml file (the one that is used to format the content and is linked with the GUIController to the same package as the Main class, however it already is.
I've been wrestling with this issue for days to no avail. Do any of you have past experiences with this issue? If so, how did you resolve it? Thanks a lot.

If there is an Exception while the file is being read, not when opening the file, an unchecked exception is thrown for the Files.lines stream operation (Stream.forEach doesn't have a throws clause).
This happens here
Files.lines(Paths.get("res/ids/people_ids.txt")).forEach(s -> {
people.put(s.replaceAll(":.*", "").trim(), Integer.parseInt(s.replaceAll(".*:", "")));
});
, which you can easily see in the stacktrace:
Caused by: java.io.UncheckedIOException: java.nio.charset.MalformedInputException: Input length = 1
(This is caused by the wrong Charset being used, see Files.readAllBytes vs Files.lines getting MalformedInputException )
You don't catch this kind of exception with your catch clause:
} catch (IOException e) {
You need to use
} catch (Exception e) {
to catch the unchecked exceptions too.

JAXB won't unmarshal my previously marshalled interface impls

Here is my working marshalling code:
For starters I have an Entity class with something like the following:
#XmlRootElement
#XmlAccessorType(XmlAccessType.NONE)
public final class Entity implements {
private Map<String, Component> components = new HashMap<String, Component>();
#XmlElementWrapper(name="components")
#XmlAnyElement
public List<Component> getComponentList() {
return new ArrayList<Component>(components.values());
}
public void setComponentList(List<Component> comps) {
for(Component c : comps) {
components.put(c.getComponentType(), c);
}
}
...
}
Component is a very varied interface but all implementations are nice and round beans carefully annotated.
Now, marshalling produces some good looking XML
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<entity>
<components>
<containerComponent>
<children>
<entity>
<components>
<containerComponent>
<children>
<entity>
<components>
<directionComponent>
<direction x="0.0" y="1.0"/>
</directionComponent>
<sizeComponent>
<size x="52.0" y="12.0"/>
</sizeComponent>
...
As you can see, each component type has its very own tag name but that doesn't seem to be enough for JAXB because
Exception in thread "main" java.lang.ClassCastException: com.sun.org.apache.xerces.internal.dom.ElementNSImpl cannot be cast to tobacco.core.components.Component
at tobacco.core.components.Entity.setComponentList(Entity.java:121)
at tobacco.core.components.Entity$JaxbAccessorM_getComponentList_setComponentList_java_util_List.set(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.reflect.Lister$CollectionLister.endPacking(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.reflect.Lister$CollectionLister.endPacking(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.Scope.finish(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.UnmarshallingContext.endScope(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.property.ArrayERProperty$ItemsLoader.leaveElement(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.UnmarshallingContext.endElement(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.SAXConnector.endElement(Unknown Source)
at com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.endElement(Unknown Source)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanEndElement(Unknown Source)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl$FragmentContentDriver.next(Unknown Source)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentScannerImpl.next(Unknown Source)
at com.sun.org.apache.xerces.internal.impl.XMLNSDocumentScannerImpl.next(Unknown Source)
at com.sun.org.apache.xerces.internal.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown Source)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown Source)
at com.sun.org.apache.xerces.internal.parsers.XML11Configuration.parse(Unknown Source)
at com.sun.org.apache.xerces.internal.parsers.XMLParser.parse(Unknown Source)
at com.sun.org.apache.xerces.internal.parsers.AbstractSAXParser.parse(Unknown Source)
at com.sun.org.apache.xerces.internal.jaxp.SAXParserImpl$JAXPSAXParser.parse(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.UnmarshallerImpl.unmarshal0(Unknown Source)
at com.sun.xml.internal.bind.v2.runtime.unmarshaller.UnmarshallerImpl.unmarshal(Unknown Source)
at javax.xml.bind.helpers.AbstractUnmarshallerImpl.unmarshal(Unknown Source)
at javax.xml.bind.helpers.AbstractUnmarshallerImpl.unmarshal(Unknown Source)
at javax.xml.bind.helpers.AbstractUnmarshallerImpl.unmarshal(Unknown Source)
at javax.xml.bind.helpers.AbstractUnmarshallerImpl.unmarshal(Unknown Source)
at tobacco.core.serialization.XmlEntityConverter.toEntity(XmlEntityConverter.java:32)
at tobacco.core.loader.XmlLoader.loadEntityTree(XmlLoader.java:43)
at tobacco.game.test.main.Main.main(Main.java:75)
At the other end of the process I receive ElementNSImpl objects.
I though about using an ObjectFactory but after reading and testing I'm almost convinced it's no use: I couldn't find a way to access tag name on the creator method, and even if I could I'm not so sure JAXB would just accept my object and fill its properties happily or if I would have to fill them myself, which absolutely impractical.
I think this guy had the same problem. Does it work out of the box with MOXy? Is there a way to do this without switching implementations?

You can use #XmlElements annotation instead of #XmlAnyElement and list all possible subclasses like in example:
#XmlElementWrapper(name = "components")
#XmlElements(
{
#XmlElement(name = "directionComponent", type = DirectionComponent.class),
#XmlElement(name = "sizeComponent", type = SizeComponent.class),
})
public List<Component> getComponentList()
{
return new ArrayList<Component>(components.values());
}
Also, in this case you don't need to use #XmlRootElement annotation on DirectionComponent and SizeComponent classes.
PS. Also, now you can use List of components instead of Map
#XmlRootElement
#XmlAccessorType(XmlAccessType.NONE)
public final class Entity
{
private List<Component> components = new ArrayList<Component>();
#XmlElementWrapper(name = "components")
#XmlElements(
{
#XmlElement(name = "directionComponent", type = DirectionComponent.class),
#XmlElement(name = "sizeComponent", type = SizeComponent.class),
})
public List<Component> getComponentList()
{
return components;
}
public void setComponentList(List<Component> comps)
{
this.components = comps;
}
//...
}

Batik IllegalStateException when resizing the JComponent containing the JSVGCanvas

My program seems to work quite well, but I keep getting "IllegalStateExceptions: RunnableQueue not started or has exited" from time to time, when I try to resize my component. I have set the documentState to ALWAYS_DYNAMIC and I have read that you are supposed to use the JSVGCanvas' UpdateManager and call invokelater(). I understand that it is available after the first time that
gvtBuildCompleted(GVTTreeBuilderEvent e)
is called, so I check whether it is running before I use it but I still get the exception.
The following method is called by a thread repeatedly and seems to cause the exception:
private void updateDomTree(final SVGComponent component, final Document doc)
{
if(component.getSvgCanvas().getUpdateManager() != null && component.getSvgCanvas().getUpdateManager().isRunning())
{
component.getSvgCanvas().getUpdateManager().getUpdateRunnableQueue().invokeLater(new Runnable()
{
public void run()
{
final Node newNode = doc.getChildNodes().item(0).getFirstChild();
//could be easier to get this value, but ... it works.
String newNodeId = newNode.getAttributes().getNamedItem("id").getFirstChild().getNodeValue();
NodeList nodes = component.getSvgDocument().getDocumentElement().getChildNodes();
Node updateNode = findElementById(nodes, newNodeId);
resizeComponent(component, doc);
component.getSvgCanvas().getSVGDocument().adoptNode(newNode);
component.getSvgCanvas().getSVGDocument().getDocumentElement().replaceChild(newNode, updateNode);
component.refreshSVGCanvas();
}
});
}
}
The actual resizing is done here:
protected void resizeComponent(SVGComponent component, Document doc)
{
Element svgRoot = doc.getDocumentElement();
final int svgWidth = Integer.parseInt(svgRoot.getAttribute("width"));
final int svgHeight = Integer.parseInt(svgRoot.getAttribute("height"));
String[] viewBox = svgRoot.getAttribute("viewBox").split(" ");
int viewBoxLeft = Integer.parseInt(viewBox[0]);
int viewBoxTop = Integer.parseInt(viewBox[1]);
final float factor = component.getScaleFactor();
String[] viewBoxOld = component.getSvgDocument().getDocumentElement().getAttribute("viewBox").split(" ");
int viewBoxLeftOld = Integer.parseInt(viewBoxOld[0]);
int viewBoxTopOld = Integer.parseInt(viewBoxOld[1]);
int xDiff = (int) ((viewBoxLeftOld - viewBoxLeft)*factor);
int yDiff = (int) ((viewBoxTopOld - viewBoxTop)*factor);
if ( viewBoxLeftOld != viewBoxLeft ) //If there is additional content left
{
component.setLocation(component.getLocation().x - xDiff, component.getLocation().y);
}
if ( viewBoxTopOld != viewBoxTop ) //If there is additional content right)
{
component.setLocation(component.getLocation().x, component.getLocation().y - yDiff);
}
component.getSvgDocument().getDocumentElement().setAttribute("width",""+svgWidth);
component.getSvgDocument().getDocumentElement().setAttribute("height",""+svgHeight);
component.getSvgDocument().getDocumentElement().setAttribute("viewBox", ""+viewBoxLeft+" "+viewBoxTop+" "+svgWidth+" "+svgHeight);
component.setSize((int)(svgWidth*factor),(int)(svgHeight*factor));
}
The method
refreshJSVGCanvas()
calls
JSVGCanvas.setDocument(Document);
JSVGCanvas.setSize(int, int);
Here's the full stack trace:
Exception in thread "AWT-EventQueue-0" java.lang.IllegalStateException: RunnableQueue not started or has exited
at org.apache.batik.util.RunnableQueue.invokeLater(RunnableQueue.java:277)
at org.apache.batik.swing.svg.AbstractJSVGComponent.updateRenderingTransform(AbstractJSVGComponent.java:1057)
at org.apache.batik.swing.gvt.AbstractJGVTComponent$1.componentResized(AbstractJGVTComponent.java:237)
at java.awt.AWTEventMulticaster.componentResized(Unknown Source)
at java.awt.Component.processComponentEvent(Unknown Source)
at java.awt.Component.processEvent(Unknown Source)
at java.awt.Container.processEvent(Unknown Source)
at java.awt.Component.dispatchEventImpl(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
at java.awt.EventQueue.access$200(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.awt.EventQueue$3.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.awt.EventQueue$4.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.ProtectionDomain$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
Thanks in advance, I have searched everywhere and tried a lot, but could not find a solution.
Edit:
This is the invokeLater-Method of Batik where the Exception is actually thrown:
public void invokeLater(Runnable r) {
if (runnableQueueThread == null) {
throw new IllegalStateException
("RunnableQueue not started or has exited");
}
synchronized (list) {
list.push(new Link(r));
list.notify();
}
}
runnableQueueThrad is set inside that class' run()-Method and set to null at the end.
So I guess I have to do some kind of synchronization.

Hazard a guess, the "public void run()" code should not be inside another method and really is a thread class/interface objects so called constructor(interface version actually).
Remove it to its own class(e.g. nested subclass to preserve scope) and implement the "thread runnable" interface on the class to place the "run()" method in it to use.
Stack trace says the run method is not available because it does not actually have such a method(or at least not properly declared) so it is in an "illegal state".