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Using eclipse with processing, cannot get java application to run

so i am just trying eclipse with processing and are having a problem with getting the java application to run.
I am basically following this tutorial: https://processing.org/tutorials/eclipse/
I have followed the steps but when i get to this part:
import processing.core.PApplet;
public class UsingProcessing extends PApplet{
public static void main(String[] args) {
PApplet.main("UsingProcessing");
}
}
No errors or nothing but when i press run (run as java application), a java program opens (no window, i can just see the program in the bottom part of the screen). Then it closes after a couple of seconds.
I also get the following errors:
java.lang.NoClassDefFoundError: com/apple/eawt/QuitHandler
at java.base/java.lang.Class.getDeclaredMethods0(Native Method)
at java.base/java.lang.Class.privateGetDeclaredMethods(Class.java:3119)
at java.base/java.lang.Class.getMethodsRecursive(Class.java:3260)
at java.base/java.lang.Class.getMethod0(Class.java:3246)
at java.base/java.lang.Class.getMethod(Class.java:2065)
at processing.core.PApplet.runSketch(PApplet.java:10707)
at processing.core.PApplet.main(PApplet.java:10504)
at processing.core.PApplet.main(PApplet.java:10486)
at UsingProcessing.main(UsingProcessing.java:6)
Caused by: java.lang.ClassNotFoundException: com.apple.eawt.QuitHandler
at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:582)
at java.base/jdk.internal.loader.ClassLoaders$AppClassLoader.loadClass(ClassLoaders.java:190)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:499)
... 9 more
That part of code should at least give me an empty sketch but i get nothing..
This guy got it to work but i cant.. https://www.youtube.com/watch?v=0cqSjyvA8EY
I can assure you that i have imported the processing library correct, so that is not where the problem lays. I believe that it is some problem with my java? I am using a macbook pro and the following java:
Java(TM) SE Runtime Environment 18.3 (build 10.0.1+10)
Java HotSpot(TM) 64-Bit Server VM 18.3 (build 10.0.1+10, mixed mode)
Thankful for all the help and I am kind of new to this so please be gentle if anything is wrong!
EDIT:
I have also tried with IntelliJ without luck, the same thing, java opens for a brief moment and then closes. This video was my guide: https://www.youtube.com/watch?v=_h2GZgnPcnM

I can assure you that i have imported the processing library correct, so that is not where the problem lays.
You need more than just the core.jar library. In your case you need whatever .jar file contains the com/apple/eawt/QuitHandler class.
This answer says that the .jar you're looking for comes with the Mac JDK. Try adding that .jar file to your classpath.

So i believe the problem is sort of solved. The problem was (i think) with the java that apple uses(?). So i downgraded to the Processing 2 core.jar and everything worked fine.
Found here: https://github.com/processing/processing/issues/5371
and a link that i did not fully understand : https://github.com/processing/processing/wiki/Supported-Platforms#java-9
The guy there suggests that you should downgrade your jdk(?), but I think that it was processing 2 that was discussed (when i did that it did not work). So for now, everything in eclipse done with processing has to be done with processing 2.
This is strange because the tutorial on processings website made it work with processing 3
EDIT: the previous answer was asked more than five years ago..

Cannot get Jep to work with Eclipse

For one of my projects I have the need to mix Java with some well established Python code, so I turned my attention to JEP as this seems to be the perfect solution to my problem. I am using Java 1.8 and Python 3.6 on Mac OSX, and my Java IDE is Eclipse.
Unfortunately, I struggle to get this to work, mainly because I am really a newby I think.
In Eclipse, I have set my Build path to include the 'jep-3.7.1.jar', and I have also linked the path to the native '.so' file to 'Users/me/anaconda3/lib/python3.6/site-packages/jep/'. So it seems like I have done everything I need, but when I try to run a simple code that calls for a Jep object I get the following naste exception:
Exception in thread "main" java.lang.UnsatisfiedLinkError: /Users/me/anaconda3/lib/python3.6/site-packages/jep/jep.cpython-36m-darwin.so: dlopen(/Users/me/anaconda3/lib/python3.6/site-packages/jep/jep.cpython-36m-darwin.so, 1): Library not loaded: #rpath/libpython3.6m.dylib
Referenced from: /Users/me/anaconda3/lib/python3.6/site-packages/jep/jep.cpython-36m-darwin.so
Reason: image not found
at java.lang.ClassLoader$NativeLibrary.load(Native Method)
at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1941)
at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1861)
at java.lang.Runtime.loadLibrary0(Runtime.java:870)
at java.lang.System.loadLibrary(System.java:1122)
at jep.Jep.<clinit>(Jep.java:217)
at mixingPython.mixJvcPyth.getDataFromPython(mixJvcPyth.java:11)
at mixingPython.mixJvcPyth.main(mixJvcPyth.java:29)/
I am sure that this is basic, but if anyone could help it would be great!
Cedric

RNetLogo Class Error

I've got one week old clean install of OS X (10.12.6) with new installs of R (3.4.1), rJava (0.9-8), and Oracle Java 8 (1.8.0_144-b01). I'm having trouble getting RNetLogo (1.0-4) to start (using NLStart()). Also, my version of Netlogo is 6.0.1.
The code I'm running is:
library(RNetLogo)
NLStart("/Applications/NetLogo 6.0.1/Java",
gui = FALSE, nl.jarname = "netlogo-6.0.1.jar")
The error I'm experiencing is similar to what many others have experienced with this and previous versions of NetLogo and RNetLogo (examples: 1, 2, & 3). I have tried all of the fixes recommended on each of the links (above) but haven't found one that gets me past this error.
Here are the error messages:
java.lang.NoClassDefFoundError: org/nlogo/workspace/Controllable
at java.lang.Class.forName0(Native Method)
at java.lang.Class.forName(Class.java:348)
Caused by: java.lang.ClassNotFoundException
at RJavaClassLoader.findClass(RJavaClassLoader.java:383)
at java.lang.ClassLoader.loadClass(ClassLoader.java:424)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 2 more
One in one of the message threads above, they suggest that it is a bug in RNetLogo. This may be true, but I can't find an active message board or bug/issue list associated with this package (it is being regularly maintained).

I reached out to the RNetLogo package maintainer (Jan Thiele) who provided me with an alternate R-based startup procedure for using the NetLogo GUI (credit goes to Robert Schlicht from University of Dresden).
Below is a simplified version of the startup procedure that they provided. To make it work, you may need to install (or reinstall) up-to-date versions of the packages: rJava, JGR, and RNetLogo.
Essentially, the procedure uses base R or RStudio to kick off a different R environment (Java GUI for R -- JGR) that is working with NetLogo on the Mac.
Here's how I start JGR (you may need to adjust the JDK version number):
#Load Java
dyn.load("/Library/Java/JavaVirtualMachines/jdk1.8.0_144.jdk/Contents/Home/jre/lib/server/libjvm.dylib")
JGR::JGR() #Start JGR
Then in the Java GUI for R (JGR) start NetLogo:
library(RNetLogo)
NLStart("/Applications/NetLogo 6.0.1/Java", nl.jarname = "netlogo-6.0.1.jar")
Notes:
The "full" path is required for NLStart's nl.path argument.
NetLogo 6.0.2 was recently released and this procedure appears to work fine with that version too.

Oracle JDK Update 5 (1.7.0_05) not working on SUSE Linux Enterprise Server 11. EOFException while connecting to Javaspace Blackboard (JINI)

We are trying to run a process (broker) from a SUSE Linux Enterprise Server 11 (java-1_7_0-ibm) which connects to a Javaspace Blackboard (JINI) deployed on another linux machine. (CentOs with Open JDK "1.7.0_05-icedtea" version)
Stack Trace :
INFO: Starting broker
Exception in thread "main" java.lang.ExceptionInInitializerError
at java.lang.J9VMInternals.initialize(J9VMInternals.java:259)
at net.jini.jeri.BasicInvocationHandler.invokeRemoteMethod(BasicInvocationHandler.java:653)
at net.jini.jeri.BasicInvocationHandler.invoke(BasicInvocationHandler.java:528)
at com.sun.jini.reggie.$Proxy0.lookup(Unknown Source)
at com.sun.jini.reggie.RegistrarProxy.lookup(RegistrarProxy.java:128)
at edu.vt.ndssl.blackboard.JiniSpaceService.findSpace(JiniSpaceService.java:372)
at edu.vt.ndssl.blackboard.JiniSpaceService.<init>(JiniSpaceService.java:74)
at edu.vt.ndssl.blackboard.JavaSpaceBlackboard.<init>(JavaSpaceBlackboard.java:31)
at edu.vt.ndssl.blackboard.BlackboardFactory.make(BlackboardFactory.java:28)
at edu.vt.ndssl.broker.Broker.<init>(Broker.java:53)
at edu.vt.ndssl.broker.Broker.main(Broker.java:231)
Caused by: java.lang.RuntimeException: Unexpected exception
at com.sun.jini.logging.Levels.createLevel(Levels.java:142)
at com.sun.jini.logging.Levels.<clinit>(Levels.java:52)
at java.lang.J9VMInternals.initializeImpl(Native Method)
at java.lang.J9VMInternals.initialize(J9VMInternals.java:237)
... 10 more
Caused by: java.io.EOFException
at java.io.ObjectInputStream$BlockDataInputStream.peekByte(ObjectInputStream.java:2667)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1387)
at java.io.ObjectInputStream.defaultReadFields(ObjectInputStream.java:2059)
at java.io.ObjectInputStream.readSerialData(ObjectInputStream.java:1984)
at java.io.ObjectInputStream.readOrdinaryObject(ObjectInputStream.java:1867)
at java.io.ObjectInputStream.readObject0(ObjectInputStream.java:1419)
at java.io.ObjectInputStream.readObject(ObjectInputStream.java:420)
at com.sun.jini.logging.Levels.createLevel(Levels.java:138)
... 13 more
Same code works fine with Java 1.6 version upto 26.
I am looking for a correct version of Java to be installed on the SUSE Linux Enterprise Server which will be compatible with this OS and also equivalent to the Oracle JDK Update 5 or Open JDK Version 1.7.0_05 (icedtea).

Apparently, the root cause of the problem is that Oracle has made an incompatible change to the serialization format of the com.sun.jini.logging.Levels class. The change reportedly happened in Oracle JDK 1.6.0_38 and JDK 1.7.0_13, and has presumably made it into recent OpenJDK versions as well.
This problem has manifested in a variety of projects that use JINI. Examples:
https://issues.apache.org/jira/browse/RIVER-415 + https://issues.apache.org/jira/browse/RIVER-416.
https://cloudifysource.zendesk.com/entries/23079726-bootstrap-localcloud-not-working-Could-not-initialize-class-com-sun-jini-logging-Levels
More examples can be found by searching for "com.sun.jini.logging.Levels EOFException".
I can't say what the solution is / would be for you, but I have a couple of ideas:
Avoidance: I think you can avoid the problem if you don't mix pre and post-change JVM versions in your application network.
If you need to upgrade your application JVMs, I suggest that you upgrade them all, and then do a complete shutdown/restart of your JINI applications and services.
Fix your applications: It appears that the Apache River project fixed the problem by modifying the JINI code. As the issue ticket says:
The com.sun.jini.logging.Levels class produces a RuntimeException with the latest version of Java (both 1.6 and 1.7). The issue surrounds creation of custom java.util.logging.Level. The current implementation uses a ClassReplacingObjectOutputStream and the LevelData approach. By removing this approach and creating a subclass of java.util.logging.Level the issue gets resolved.
The issue ticket has a lot of discussion on the best way to do this, proposed patches and links to the checkin where they actually implemented the fix.

Plugin inside Sametime with Lotus Notes Classess - The Whole Story

It's gonna be a long read so Thanks for being patient :).
I have been trying to develop a plugin to be executed inside Lotus Sametime. The idea of this plugin is to extract the calendar entries for a given date and then display it in sametime. Simple isn't it, i thought so too. Apparently I was wrong and grossly misunderstood the JVM version compatibility issues. I first did an independent test in the default Java 1.6 and it worked fine, I got the entries and got the code ready to move to the Sametime Development environment.
I moved to the plugin development environment to insert my code.My first issue came, when I added the Notes.jar to the External jar list and the import lotus.domino line. The IDE told me this
The type org.omg.CORBA.UserException cannot be resolved. It is indirectly referenced from required .class files
After some googling , i referenced the ibmorbapi.jar in the project and got it running. Unfortunately for me even that didn't work out. The plugin itself failed to load and this is what i got
java.lang.NoClassDefFoundError: lotus.notes.Session
at java.lang.J9VMInternals.verifyImpl(Native Method)
at java.lang.J9VMInternals.verify(J9VMInternals.java:59)
at java.lang.J9VMInternals.initialize(J9VMInternals.java:120)
at java.lang.Class.newInstanceImpl(Native Method)
at java.lang.Class.newInstance(Class.java:1244)
at org.eclipse.core.internal.registry.osgi.RegistryStrategyOSGI.createExecutableExtension(RegistryStrategyOSGI.java:157)
at org.eclipse.core.internal.registry.ExtensionRegistry.createExecutableExtension(ExtensionRegistry.java:759)
at org.eclipse.core.internal.registry.ConfigurationElement.createExecutableExtension(ConfigurationElement.java:243)
at org.eclipse.core.internal.registry.ConfigurationElementHandle.createExecutableExtension(ConfigurationElementHandle.java:51)
at com.ibm.collaboration.realtime.imhub.ImHub.loadMiniAppExtensions(ImHub.java:416)
at com.ibm.collaboration.realtime.imhub.ImHub.getMiniApps(ImHub.java:356)
at com.ibm.collaboration.realtime.imhub.workbench.ImHubWorkbenchWindowAdvisorShelf.transformMiniApps(ImHubWorkbenchWindowAdvisorShelf.java:354)
at com.ibm.collaboration.realtime.imhub.workbench.ImHubWorkbenchWindowAdvisorShelf.createWindowContents(ImHubWorkbenchWindowAdvisorShelf.java:179)
at org.eclipse.ui.internal.WorkbenchWindow.createContents(WorkbenchWindow.java:938)
at org.eclipse.jface.window.Window.create(Window.java:426)
at org.eclipse.ui.internal.Workbench.busyOpenWorkbenchWindow(Workbench.java:805)
at org.eclipse.ui.internal.Workbench.doOpenFirstTimeWindow(Workbench.java:1453)
at org.eclipse.ui.internal.Workbench.openFirstTimeWindow(Workbench.java:1404)
at org.eclipse.ui.internal.WorkbenchConfigurer.openFirstTimeWindow(WorkbenchConfigurer.java:190)
at org.eclipse.ui.application.WorkbenchAdvisor.openWindows(WorkbenchAdvisor.java:708)
at org.eclipse.ui.internal.Workbench.init(Workbench.java:1101)
at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:1863)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:422)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
at com.ibm.collaboration.realtime.ui.WorkbenchAdapter.createAndRunWorkbench(WorkbenchAdapter.java:103)
at com.ibm.collaboration.realtime.ui.WorkbenchAdapter.run(WorkbenchAdapter.java:85)
at com.ibm.collaboration.realtime.application.RTCApplication.run(RTCApplication.java:765)
at org.eclipse.core.internal.runtime.PlatformActivator$1.run(PlatformActivator.java:78)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:92)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:68)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:177)
at java.lang.reflect.AccessibleObject.invokeL(AccessibleObject.java:211)
at java.lang.reflect.Method.invoke(Method.java:272)
at org.eclipse.core.launcher.Main.invokeFramework(Main.java:336)
at org.eclipse.core.launcher.Main.basicRun(Main.java:280)
at org.eclipse.core.launcher.Main.run(Main.java:977)
at org.eclipse.core.launcher.Main.main(Main.java:952)
Since that was not gonna work. I thought why not create the NotesCalendarExtraction part into a separate jar execution file and get a xml file with the calendar entries in it and then give it to the plugin to show the entries. I know it was not the best solution but i was desperate and wanted to get this working. In anycase, the idea kinda worked well when I had hardcoded the jar file and and the path to the generated xml file. Btw I was executing the jar file using the getRuntime.exec module in java. Time came to get it running generically and unfortunately for me the exec module was not accepting spaces in its path so program files was out of question. I was not sure if this was right method but then the jar as such was not executing either for some reason. I tried putting in a bat file with the appropriate command line parameters and it generated the xml when executed in the command line but not when running from the eclipse ide for reasons known only to the IDE. I was out of options at this point and I got my hands on another plugin which did exactly the same thing with regard to getting the calendar entries. I decompiled plugin and checked out the source code and saw the code was using a class loader to do the job. A new hope got into me when i saw this code. After some googling i put together some code which did the job for me. Time came for the acid test, i put the code into the plugin env and this is what I got.
!ENTRY org.eclipse.ui 4 0 2009-09-27 22:05:55.996
!MESSAGE (org/omg/CORBA/UserException) bad major version at offset=6
!STACK 0
java.lang.UnsupportedClassVersionError: (org/omg/CORBA/UserException) bad major version at offset=6
at java.lang.ClassLoader.defineClassImpl(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:246)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:109)
at java.net.URLClassLoader.findClassImpl(URLClassLoader.java:1028)
at java.net.URLClassLoader$4.run(URLClassLoader.java:549)
at java.security.AccessController.doPrivileged(AccessController.java:213)
at java.net.URLClassLoader.findClass(URLClassLoader.java:547)
at java.lang.ClassLoader.loadClass(ClassLoader.java:625)
at java.lang.ClassLoader.loadClass(ClassLoader.java:582)
at java.lang.ClassLoader.defineClassImpl(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:246)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:109)
at java.net.URLClassLoader.findClassImpl(URLClassLoader.java:1028)
at java.net.URLClassLoader$4.run(URLClassLoader.java:549)
at java.security.AccessController.doPrivileged(AccessController.java:213)
at java.net.URLClassLoader.findClass(URLClassLoader.java:547)
at java.lang.ClassLoader.loadClass(ClassLoader.java:625)
at java.lang.ClassLoader.loadClass(ClassLoader.java:582)
at java.lang.J9VMInternals.verifyImpl(Native Method)
at java.lang.J9VMInternals.verify(J9VMInternals.java:59)
at java.lang.J9VMInternals.initialize(J9VMInternals.java:120)
at java.lang.reflect.AccessibleObject.initializeClass(Native Method)
at java.lang.reflect.Method.invoke(Method.java:248)
at com.ibm.collaboration.realtime.lotusnotes.LotusNotes.getNotesSession(LotusNotes.java:179)
at com.ibm.notes.sametime.calendar.hack.SpeakUpMiniApp.createControl(SpeakUpMiniApp.java:58)
at com.ibm.collaboration.realtime.miniapp.MiniAppViewPart.createPartControl(MiniAppViewPart.java:41)
at com.ibm.rcp.ui.internal.shelf.ShelfViewReference.createPartHelper(ShelfViewReference.java:330)
at com.ibm.rcp.ui.internal.shelf.ShelfViewReference.createPart(ShelfViewReference.java:201)
at org.eclipse.ui.internal.WorkbenchPartReference.getPart(WorkbenchPartReference.java:566)
at com.ibm.rcp.ui.shelf.ShelfPage.activatePart(ShelfPage.java:1168)
at com.ibm.rcp.ui.shelf.ShelfPage.access$10(ShelfPage.java:1159)
at com.ibm.rcp.ui.shelf.ShelfPage$7.handleEvent(ShelfPage.java:1312)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:66)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:938)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:962)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:947)
at org.eclipse.swt.widgets.Widget.notifyListeners(Widget.java:706)
at com.ibm.rcp.swt.swidgets.SViewForm.toggleMaximize(SViewForm.java:1501)
at com.ibm.rcp.swt.swidgets.SViewStack.expand(SViewStack.java:596)
at com.ibm.rcp.swt.swidgets.SViewStack.toggleMaximize(SViewStack.java:526)
at com.ibm.rcp.swt.swidgets.SViewStack$5.handleEvent(SViewStack.java:312)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:66)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:938)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:962)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:947)
at org.eclipse.swt.widgets.Widget.notifyListeners(Widget.java:706)
at com.ibm.rcp.swt.swidgets.SViewForm.onMouseUpMaximize(SViewForm.java:1437)
at com.ibm.rcp.swt.swidgets.SViewForm.onMouseUp(SViewForm.java:1127)
at com.ibm.rcp.swt.swidgets.SViewForm$4.handleEvent(SViewForm.java:421)
at org.eclipse.swt.widgets.EventTable.sendEvent(EventTable.java:66)
at org.eclipse.swt.widgets.Widget.sendEvent(Widget.java:938)
at org.eclipse.swt.widgets.Display.runDeferredEvents(Display.java:3673)
at org.eclipse.swt.widgets.Display.readAndDispatch(Display.java:3284)
at org.eclipse.ui.internal.Workbench.runEventLoop(Workbench.java:1930)
at org.eclipse.ui.internal.Workbench.runUI(Workbench.java:1894)
at org.eclipse.ui.internal.Workbench.createAndRunWorkbench(Workbench.java:422)
at org.eclipse.ui.PlatformUI.createAndRunWorkbench(PlatformUI.java:149)
at com.ibm.collaboration.realtime.ui.WorkbenchAdapter.createAndRunWorkbench(WorkbenchAdapter.java:103)
at com.ibm.collaboration.realtime.ui.WorkbenchAdapter.run(WorkbenchAdapter.java:85)
at com.ibm.collaboration.realtime.application.RTCApplication.run(RTCApplication.java:765)
at org.eclipse.core.internal.runtime.PlatformActivator$1.run(PlatformActivator.java:78)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.runApplication(EclipseAppLauncher.java:92)
at org.eclipse.core.runtime.internal.adaptor.EclipseAppLauncher.start(EclipseAppLauncher.java:68)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:400)
at org.eclipse.core.runtime.adaptor.EclipseStarter.run(EclipseStarter.java:177)
at java.lang.reflect.AccessibleObject.invokeL(AccessibleObject.java:211)
at java.lang.reflect.Method.invoke(Method.java:272)
at org.eclipse.core.launcher.Main.invokeFramework(Main.java:336)
at org.eclipse.core.launcher.Main.basicRun(Main.java:280)
at org.eclipse.core.launcher.Main.run(Main.java:977)
at org.eclipse.core.launcher.Main.main(Main.java:952)
It's really frustrating again to the version error. The sametime plugin dev environment runs on J9 JVM and the for some reason that is not enough for notes.jar ibmorbapi.jar i guess. Atleast that is what my assumption is about the error.
I would appreciate any help on this from you guys. "org/omg/CORBA/UserException" seems to be crux of the issue and I am simply not able to get over it. I can get the external jar execution working in some complex way but I don't want to do it as i feel its the best way to get calendar entries from notes. I am sure it has to be reasonably simple and any help on this would be appreciated.

There are two jars that are related to talking to a Notes application.
Notes.jar - This is a JNI wrapper for LSXBE classes. In order for it to work correctly you will need Lotus Notes installed on the machine and the main directory on the system PATH.
NCSO.jar - This is for making DIIOP connections to a Domino server. This does not require Lotus Notes to be installed. It does require a Domino server you can connect to which has DIIOP enabled on it.
It is unclear if you have Notes installed?
The jars are also specific to certain JVM versions.
Java 6 - Notes 8.5.1
Java 5 - Notes 8.x
Java 1.4.2 - Notes 7.x
Java 1.3 - Notes 6.x
"bad major version at offset" means your are running the wrong jar for the JVM (eg. 851 jar on 1.4.2).
To rule out any configuration issues first I recommend creating just a simple java application which makes a connection to Notes/Domino. Once that works then you know your paths/jars are all set up correctly.

Looks like CORBA classes are compiled for a newer JDK. You need to find an older version of the JAR, or, alternatively, get the sources and compile them under your JDK (J9?). From what I see from a brief Google search, J9 is either 1.4 or even 1.3 compatible.
Also, make sure that all the code you compile yourself has the same target Java version, i.e. 1.4 (1.3?) in this case.