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Connecting to data source using ssl in Karaf, getting java.lang.NoClassDefFoundError: javax/net/ssl/TrustManager

I'm running Servicemix 6.1.3. I have a data source (.cfg-file) using ssl:
url=jdbc:mysql://mysqlcluster-test.dot.com:3306/mydb?useSSL=true
user=cs_dev
password=mypwd
When I deploy my bundle, I get this error message:
2018-03-20 14:02:51,054 | ERROR | mix-6.1.3/deploy | JdbcMessageIdRepository | 251 - org.apache.camel.camel-sql - 2.16.4 | Can't create table for JdbcMessageIdRepository with query 'CREATE TABLE MYTABLE(name VARCHAR(255), id VARCHAR(100), createdAt TIMESTAMP)' because of: Could not get JDBC Connection; nested exception is java.sql.SQLException: java.lang.NoClassDefFoundError: javax/net/ssl/TrustManager. This may be a permissions problem. Please create this table and try again.
2018-03-20 14:02:51,056 | ERROR | mix-6.1.3/deploy | BlueprintCamelContext | 156 - org.apache.camel.camel-blueprint - 2.16.4 | Error occurred during starting Camel: CamelContext(SystemIntegration.cu) due Could not get JDBC Connection; nested exception is java.sql.SQLException: java.lang.NoClassDefFoundError: javax/net/ssl/TrustManager
org.springframework.jdbc.CannotGetJdbcConnectionException: Could not get JDBC Connection; nested exception is java.sql.SQLException: java.lang.NoClassDefFoundError: javax/net/ssl/TrustManager
at org.springframework.jdbc.datasource.DataSourceUtils.getConnection(DataSourceUtils.java:80)[250:org.apache.servicemix.bundles.spring-jdbc:3.2.17.RELEASE_1]
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:382)[250:org.apache.servicemix.bundles.spring-jdbc:3.2.17.RELEASE_1]
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:428)[250:org.apache.servicemix.bundles.spring-jdbc:3.2.17.RELEASE_1]
at org.apache.camel.processor.idempotent.jdbc.JdbcMessageIdRepository$1.doInTransaction(JdbcMessageIdRepository.java:70)[251:org.apache.camel.camel-sql:2.16.4]
at org.apache.camel.processor.idempotent.jdbc.JdbcMessageIdRepository$1.doInTransaction(JdbcMessageIdRepository.java:60)[251:org.apache.camel.camel-sql:2.16.4]
at org.springframework.transaction.support.TransactionTemplate.execute(TransactionTemplate.java:131)[144:org.apache.servicemix.bundles.spring-tx:3.2.17.RELEASE_1]
at org.apache.camel.processor.idempotent.jdbc.JdbcMessageIdRepository.doStart(JdbcMessageIdRepository.java:60)[251:org.apache.camel.camel-sql:2.16.4]
at org.apache.camel.support.ServiceSupport.start(ServiceSupport.java:61)[151:org.apache.camel.camel-core:2.16.4]
at org.apache.camel.util.ServiceHelper.startService(ServiceHelper.java:74)[151:org.apache.camel.camel-core:2.16.4]
at org.apache.camel.util.ServiceHelper.startService(ServiceHelper.java:59)[151:org.apache.camel.camel-core:2.16.4]
at org.apache.camel.util.ServiceHelper.startServices(ServiceHelper.java:103)[151:org.apache.camel.camel-core:2.16.4]
...
What do I have to do in order to use datasources using ssl?

I think you may want to add the server's certificate to the KeyStore with your trusted certificates.
There are any number of ways to achieve that, but a simple solution is to compile and run
this program
as
java InstallCert hostname
Please give it a try and let us know if it works for you.

DataSource.groovy not found. grails 2.4.4

I am getting this error while running the application. I am using postgres 9.4 database. I ensured that DataSource.groovy exists. I am on MAC OS X 10.10
grails> r-a
| Starting daemon...
| Compiling 450 source files
| Parent process shutdown. Exiting...
| Error Forked Grails VM exited with error
| Starting daemon.....
| Warning No config found for the application.
| Warning DataSource.groovy not found, assuming dataSource bean is configured by Spring
| Running Grails application
objc[2087]: Class JavaLaunchHelper is implemented in both /Library/Java/JavaVirtualMachines/jdk1.7.0_75.jdk/Contents/Home/bin/java and /Library/Java/JavaVirtualMachines/jdk1.7.0_75.jdk/Contents/Home/jre/lib/libinstrument.dylib. One of the two will be used. Which one is undefined.
| Error 2015-04-10 12:24:40,201 [localhost-startStop-1] ERROR context.ContextLoader - Context initialization failed
Message: Error creating bean with name 'grailsApplication' defined in ServletContext resource [/WEB-INF/applicationContext.xml]: Invocation of init method failed; nested exception is org.codehaus.groovy.grails.exceptions.GrailsConfigurationException: Class not found loading Grails application: BootStrap
Line | Method
->> 262 | run in java.util.concurrent.FutureTask
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
Caused by GrailsConfigurationException: Class not found loading Grails application: BootStrap
->> 262 | run in java.util.concurrent.FutureTask
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
Caused by ClassNotFoundException: BootStrap
->> 366 | run in java.net.URLClassLoader$1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 355 | run in ''
| 354 | findClass in java.net.URLClassLoader
| 425 | loadClass in java.lang.ClassLoader
| 262 | run . . . in java.util.concurrent.FutureTask
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
| Error 2015-04-10 12:24:40,261 [localhost-startStop-1] ERROR context.GrailsContextLoaderListener - Error initializing the application: Error creating bean with name 'grailsApplication' defined in ServletContext resource [/WEB-INF/applicationContext.xml]: Invocation of init method failed; nested exception is org.codehaus.groovy.grails.exceptions.GrailsConfigurationException: Class not found loading Grails application: BootStrap
Message: Error creating bean with name 'grailsApplication' defined in ServletContext resource [/WEB-INF/applicationContext.xml]: Invocation of init method failed; nested exception is org.codehaus.groovy.grails.exceptions.GrailsConfigurationException: Class not found loading Grails application: BootStrap
Line | Method
->> 262 | run in java.util.concurrent.FutureTask
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
Caused by GrailsConfigurationException: Class not found loading Grails application: BootStrap
->> 262 | run in java.util.concurrent.FutureTask
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
Caused by ClassNotFoundException: BootStrap
->> 366 | run in java.net.URLClassLoader$1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 355 | run in ''
| 354 | findClass in java.net.URLClassLoader
| 425 | loadClass in java.lang.ClassLoader
| 262 | run . . . in java.util.concurrent.FutureTask
| 1145 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 745 | run in java.lang.Thread
| Error 2015-04-10 12:24:40,277 [localhost-startStop-1] ERROR core.StandardContext - Error listenerStart
| Error 2015-04-10 12:24:40,288 [localhost-startStop-1] ERROR core.StandardContext - Context [/yazh] startup failed due to previous errors
| Server running. Browse to http://localhost:8080/yazh
| Application loaded in interactive mode. Type 'stop-app' to shutdown.
| Enter a script name to run. Use TAB for completion:
| Parent process shutdown. Exiting...
| Error Forked Grails VM exited with error

This usually happens when there's an error in the Domain, Controller or Service classes. run with --stacktrace and you'll find the root cause

This isn't much of an answer, but I just experienced this error and was able to get rid of it with a grails clean and grails compile.

Spring Data java.lang.NoSuchMethodError in grails

I am using mongo db plugin and spring-data-neo4j in my grails application.
I am using latest version of SDN and mongo db plugin.
Here is my buildconfig :
grails.servlet.version = "3.0" // Change depending on target container compliance (2.5 or 3.0)
grails.project.class.dir = "target/classes"
grails.project.test.class.dir = "target/test-classes"
grails.project.test.reports.dir = "target/test-reports"
grails.project.work.dir = "target/work"
grails.project.target.level = 1.6
grails.project.source.level = 1.6
//grails.project.war.file = "target/${appName}-${appVersion}.war"
grails.server.port.http = 1111
grails.project.fork = [
// configure settings for compilation JVM, note that if you alter the Groovy version forked compilation is required
// compile: [maxMemory: 256, minMemory: 64, debug: false, maxPerm: 256, daemon:true],
// configure settings for the test-app JVM, uses the daemon by default
test: [maxMemory: 768, minMemory: 64, debug: false, maxPerm: 256, daemon:true],
// configure settings for the run-app JVM
run: [maxMemory: 768, minMemory: 64, debug: false, maxPerm: 256, forkReserve:false],
// configure settings for the run-war JVM
war: [maxMemory: 768, minMemory: 64, debug: false, maxPerm: 256, forkReserve:false],
// configure settings for the Console UI JVM
console: [maxMemory: 768, minMemory: 64, debug: false, maxPerm: 256]
]
grails.project.dependency.resolver = "maven" // or ivy
grails.project.dependency.resolution = {
// inherit Grails' default dependencies
inherits("global") {
// specify dependency exclusions here; for example, uncomment this to disable ehcache:
// excludes 'ehcache'
}
log "error" // log level of Ivy resolver, either 'error', 'warn', 'info', 'debug' or 'verbose'
checksums true // Whether to verify checksums on resolve
legacyResolve false // whether to do a secondary resolve on plugin installation, not advised and here for backwards compatibility
repositories {
inherits true // Whether to inherit repository definitions from plugins
grailsPlugins()
grailsHome()
mavenLocal()
grailsCentral()
mavenCentral()
// uncomment these (or add new ones) to enable remote dependency resolution from public Maven repositories
//mavenRepo "http://repository.codehaus.org"
//mavenRepo "http://download.java.net/maven/2/"
//mavenRepo "http://repository.jboss.com/maven2/"
}
dependencies {
// specify dependencies here under either 'build', 'compile', 'runtime', 'test' or 'provided' scopes e.g.
// runtime 'mysql:mysql-connector-java:5.1.29'
// runtime 'org.postgresql:postgresql:9.3-1101-jdbc41'
test "org.grails:grails-datastore-test-support:1.0-grails-2.4"
compile 'org.springframework.data:spring-data-neo4j-rest:3.2.0.RELEASE'
}
plugins {
// plugins for the build system only
build ":tomcat:7.0.55"
// plugins for the compile step
compile ":scaffolding:2.1.2"
compile ':cache:1.1.7'
compile ":asset-pipeline:1.9.6"
// plugins needed at runtime but not for compilation
runtime ":hibernate4:4.3.5.5" // or ":hibernate:3.6.10.17"
runtime ":database-migration:1.4.0"
runtime ":jquery:1.11.1"
compile ":mongodb:3.0.2"
// Uncomment these to enable additional asset-pipeline capabilities
//compile ":sass-asset-pipeline:1.9.0"
//compile ":less-asset-pipeline:1.10.0"
//compile ":coffee-asset-pipeline:1.8.0"
//compile ":handlebars-asset-pipeline:1.3.0.3"
}
}
With this configuration i am getting following error :
Error creating bean with name 'transactionManagerPostProcessor': Initialization of bean failed; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'transactionManager': Cannot resolve reference to bean 'mongoTransactionManager' while setting constructor argument with key [1]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mongoTransactionManager': Cannot resolve reference to bean 'mongoDatastore' while setting bean property 'datastore'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mongoDatastore': FactoryBean threw exception on object creation; nested exception is java.lang.NoSuchMethodError: org.springframework.data.util.ClassTypeInformation.from(Ljava/lang/Class;)Lorg/springframework/data/util/TypeInformation;
Line | Method
->> 334 | innerRun in java.util.concurrent.FutureTask$Sync
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 166 | run in java.util.concurrent.FutureTask
| 1146 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run in java.util.concurrent.ThreadPoolExecutor$Worker
^ 701 | run . . . in java.lang.Thread
Caused by BeanCreationException: Error creating bean with name 'transactionManager': Cannot resolve reference to bean 'mongoTransactionManager' while setting constructor argument with key [1]; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mongoTransactionManager': Cannot resolve reference to bean 'mongoDatastore' while setting bean property 'datastore'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mongoDatastore': FactoryBean threw exception on object creation; nested exception is java.lang.NoSuchMethodError: org.springframework.data.util.ClassTypeInformation.from(Ljava/lang/Class;)Lorg/springframework/data/util/TypeInformation;
->> 334 | innerRun in java.util.concurrent.FutureTask$Sync
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 166 | run in java.util.concurrent.FutureTask
| 1146 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run in java.util.concurrent.ThreadPoolExecutor$Worker
^ 701 | run . . . in java.lang.Thread
Caused by BeanCreationException: Error creating bean with name 'mongoTransactionManager': Cannot resolve reference to bean 'mongoDatastore' while setting bean property 'datastore'; nested exception is org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'mongoDatastore': FactoryBean threw exception on object creation; nested exception is java.lang.NoSuchMethodError: org.springframework.data.util.ClassTypeInformation.from(Ljava/lang/Class;)Lorg/springframework/data/util/TypeInformation;
->> 334 | innerRun in java.util.concurrent.FutureTask$Sync
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 166 | run in java.util.concurrent.FutureTask
| 1146 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run in java.util.concurrent.ThreadPoolExecutor$Worker
^ 701 | run . . . in java.lang.Thread
Caused by BeanCreationException: Error creating bean with name 'mongoDatastore': FactoryBean threw exception on object creation; nested exception is java.lang.NoSuchMethodError: org.springframework.data.util.ClassTypeInformation.from(Ljava/lang/Class;)Lorg/springframework/data/util/TypeInformation;
->> 334 | innerRun in java.util.concurrent.FutureTask$Sync
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 166 | run in java.util.concurrent.FutureTask
| 1146 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run in java.util.concurrent.ThreadPoolExecutor$Worker
^ 701 | run . . . in java.lang.Thread
Caused by NoSuchMethodError: org.springframework.data.util.ClassTypeInformation.from(Ljava/lang/Class;)Lorg/springframework/data/util/TypeInformation;
->> 255 | createMongoTemplate in org.grails.datastore.mapping.mongo.MongoDatastore
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
| 221 | afterPropertiesSet in ''
| 54 | getObject in org.grails.datastore.gorm.mongo.bean.factory.MongoDatastoreFactoryBean
| 334 | innerRun in java.util.concurrent.FutureTask$Sync
| 166 | run . . . in java.util.concurrent.FutureTask
| 1146 | runWorker in java.util.concurrent.ThreadPoolExecutor
| 615 | run . . . in java.util.concurrent.ThreadPoolExecutor$Worker
^ 701 | run in java.lang.Thread
I am using grails 2.4.3 and groovy 2.3.

Webservice Throws InstanceAlreadyExistsException in Service Mix 5.0

We are using Apache Camel, Service Mix and Smooks for our project and it contains multiple modules. Each will be deployed as bundle in servicemix.
We are Using the Webservices in some of the modules.
We are Using jaxws WebService in following ports 9191,9192,9193,...
When i deploy the second webservice bundle in ServicMix, it throws the following exception.
Kindly Advice to overcome this.
2014-05-28 11:29:15,570 | WARN | tenderThread-270 | MBeanContainer | ? ? | 53 - org.eclipse.jetty.util - 7.6.9.v20130131 | bean: org.eclipse.jetty.server.Server#3a30285e
javax.management.InstanceAlreadyExistsException: org.eclipse.jetty.server:type=server,id=0
at com.sun.jmx.mbeanserver.Repository.addMBean(Repository.java:437)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerWithRepository(DefaultMBeanServerInterceptor.java:1898)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerDynamicMBean(DefaultMBeanServerInterceptor.java:966)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerObject(DefaultMBeanServerInterceptor.java:900)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerMBean(DefaultMBeanServerInterceptor.java:324)[:1.7.0_40]
at com.sun.jmx.mbeanserver.JmxMBeanServer.registerMBean(JmxMBeanServer.java:522)[:1.7.0_40]
at org.eclipse.jetty.jmx.MBeanContainer.addBean(MBeanContainer.java:298)
at org.eclipse.jetty.jmx.MBeanContainer.add(MBeanContainer.java:139)
at org.eclipse.jetty.util.component.Container.add(Container.java:211)
at org.eclipse.jetty.util.component.Container.update(Container.java:169)
at org.eclipse.jetty.util.component.Container.update(Container.java:111)
at org.eclipse.jetty.server.Server.setConnectors(Server.java:199)
at org.eclipse.jetty.server.Server.addConnector(Server.java:173)
at org.apache.cxf.transport.http_jetty.JettyHTTPServerEngine.addServant(JettyHTTPServerEngine.java:304)
at org.apache.cxf.transport.http_jetty.JettyHTTPDestination.activate(JettyHTTPDestination.java:179)
at org.apache.cxf.transport.AbstractObservable.setMessageObserver(AbstractObservable.java:49)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.AbstractBaseBindingFactory.addListener(AbstractBaseBindingFactory.java:95)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.soap.SoapBindingFactory.addListener(SoapBindingFactory.java:893)[136:org.apache.cxf.cxf-rt-bindings-soap:2.7.10]
at org.apache.cxf.endpoint.ServerImpl.start(ServerImpl.java:131)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.doPublish(EndpointImpl.java:362)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:251)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:539)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)[:1.7.0_40]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)[:1.7.0_40]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)[:1.7.0_40]
at java.lang.reflect.Method.invoke(Method.java:606)[:1.7.0_40]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1608)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1549)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1479)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:521)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:458)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:628)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)[73:org.springframework.context:3.2.4.RELEASE]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.access$1600(AbstractDelegatedExecutionApplicationContext.java:69)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext$4.run(AbstractDelegatedExecutionApplicationContext.java:355)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.util.internal.PrivilegedUtils.executeWithCustomTCCL(PrivilegedUtils.java:85)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.completeRefresh(AbstractDelegatedExecutionApplicationContext.java:320)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.extender.internal.dependencies.startup.DependencyWaiterApplicationContextExecutor$CompleteRefreshTask.run(DependencyWaiterApplicationContextExecutor.java:132)[115:org.springframework.osgi.extender:1.2.1]
at java.lang.Thread.run(Thread.java:724)[:1.7.0_40]
2014-05-28 11:29:15,582 | WARN | tenderThread-270 | MBeanContainer | ? ? | 53 - org.eclipse.jetty.util - 7.6.9.v20130131 | bean: SelectChannelConnector#172.21.30.131:9195
javax.management.InstanceAlreadyExistsException: org.eclipse.jetty.server.nio:type=selectchannelconnector,id=0
at com.sun.jmx.mbeanserver.Repository.addMBean(Repository.java:437)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerWithRepository(DefaultMBeanServerInterceptor.java:1898)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerDynamicMBean(DefaultMBeanServerInterceptor.java:966)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerObject(DefaultMBeanServerInterceptor.java:900)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerMBean(DefaultMBeanServerInterceptor.java:324)[:1.7.0_40]
at com.sun.jmx.mbeanserver.JmxMBeanServer.registerMBean(JmxMBeanServer.java:522)[:1.7.0_40]
at org.eclipse.jetty.jmx.MBeanContainer.addBean(MBeanContainer.java:298)
at org.eclipse.jetty.jmx.MBeanContainer.add(MBeanContainer.java:146)
at org.eclipse.jetty.util.component.Container.add(Container.java:211)
at org.eclipse.jetty.util.component.Container.update(Container.java:169)
at org.eclipse.jetty.util.component.Container.update(Container.java:111)
at org.eclipse.jetty.server.Server.setConnectors(Server.java:199)
at org.eclipse.jetty.server.Server.addConnector(Server.java:173)
at org.apache.cxf.transport.http_jetty.JettyHTTPServerEngine.addServant(JettyHTTPServerEngine.java:304)
at org.apache.cxf.transport.http_jetty.JettyHTTPDestination.activate(JettyHTTPDestination.java:179)
at org.apache.cxf.transport.AbstractObservable.setMessageObserver(AbstractObservable.java:49)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.AbstractBaseBindingFactory.addListener(AbstractBaseBindingFactory.java:95)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.soap.SoapBindingFactory.addListener(SoapBindingFactory.java:893)[136:org.apache.cxf.cxf-rt-bindings-soap:2.7.10]
at org.apache.cxf.endpoint.ServerImpl.start(ServerImpl.java:131)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.doPublish(EndpointImpl.java:362)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:251)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:539)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)[:1.7.0_40]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)[:1.7.0_40]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)[:1.7.0_40]
at java.lang.reflect.Method.invoke(Method.java:606)[:1.7.0_40]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1608)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1549)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1479)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:521)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:458)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:628)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)[73:org.springframework.context:3.2.4.RELEASE]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.access$1600(AbstractDelegatedExecutionApplicationContext.java:69)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext$4.run(AbstractDelegatedExecutionApplicationContext.java:355)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.util.internal.PrivilegedUtils.executeWithCustomTCCL(PrivilegedUtils.java:85)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.completeRefresh(AbstractDelegatedExecutionApplicationContext.java:320)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.extender.internal.dependencies.startup.DependencyWaiterApplicationContextExecutor$CompleteRefreshTask.run(DependencyWaiterApplicationContextExecutor.java:132)[115:org.springframework.osgi.extender:1.2.1]
at java.lang.Thread.run(Thread.java:724)[:1.7.0_40]
2014-05-28 11:29:15,590 | WARN | tenderThread-270 | MBeanContainer | ? ? | 53 - org.eclipse.jetty.util - 7.6.9.v20130131 | bean: org.eclipse.jetty.server.handler.ContextHandlerCollection#3abda9b1
javax.management.InstanceAlreadyExistsException: org.eclipse.jetty.server.handler:type=contexthandlercollection,id=0
at com.sun.jmx.mbeanserver.Repository.addMBean(Repository.java:437)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerWithRepository(DefaultMBeanServerInterceptor.java:1898)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerDynamicMBean(DefaultMBeanServerInterceptor.java:966)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerObject(DefaultMBeanServerInterceptor.java:900)[:1.7.0_40]
at com.sun.jmx.interceptor.DefaultMBeanServerInterceptor.registerMBean(DefaultMBeanServerInterceptor.java:324)[:1.7.0_40]
at com.sun.jmx.mbeanserver.JmxMBeanServer.registerMBean(JmxMBeanServer.java:522)[:1.7.0_40]
at org.eclipse.jetty.jmx.MBeanContainer.addBean(MBeanContainer.java:298)
at org.eclipse.jetty.util.component.Container.addBean(Container.java:182)
at org.eclipse.jetty.server.handler.AbstractHandler.setServer(AbstractHandler.java:80)
at org.eclipse.jetty.server.handler.HandlerCollection.setServer(HandlerCollection.java:264)
at org.eclipse.jetty.server.handler.HandlerWrapper.setHandler(HandlerWrapper.java:81)
at org.apache.cxf.transport.http_jetty.JettyHTTPServerEngine.addServant(JettyHTTPServerEngine.java:369)
at org.apache.cxf.transport.http_jetty.JettyHTTPDestination.activate(JettyHTTPDestination.java:179)
at org.apache.cxf.transport.AbstractObservable.setMessageObserver(AbstractObservable.java:49)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.AbstractBaseBindingFactory.addListener(AbstractBaseBindingFactory.java:95)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.binding.soap.SoapBindingFactory.addListener(SoapBindingFactory.java:893)[136:org.apache.cxf.cxf-rt-bindings-soap:2.7.10]
at org.apache.cxf.endpoint.ServerImpl.start(ServerImpl.java:131)[130:org.apache.cxf.cxf-api:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.doPublish(EndpointImpl.java:362)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:251)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at org.apache.cxf.jaxws.EndpointImpl.publish(EndpointImpl.java:539)[144:org.apache.cxf.cxf-rt-frontend-jaxws:2.7.10]
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)[:1.7.0_40]
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)[:1.7.0_40]
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)[:1.7.0_40]
at java.lang.reflect.Method.invoke(Method.java:606)[:1.7.0_40]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1608)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1549)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1479)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:521)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:458)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:295)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:223)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:292)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:194)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:628)[71:org.springframework.beans:3.2.4.RELEASE]
at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:932)[73:org.springframework.context:3.2.4.RELEASE]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.access$1600(AbstractDelegatedExecutionApplicationContext.java:69)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext$4.run(AbstractDelegatedExecutionApplicationContext.java:355)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.util.internal.PrivilegedUtils.executeWithCustomTCCL(PrivilegedUtils.java:85)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.context.support.AbstractDelegatedExecutionApplicationContext.completeRefresh(AbstractDelegatedExecutionApplicationContext.java:320)[114:org.springframework.osgi.core:1.2.1]
at org.springframework.osgi.extender.internal.dependencies.startup.DependencyWaiterApplicationContextExecutor$CompleteRefreshTask.run(DependencyWaiterApplicationContextExecutor.java:132)[115:org.springframework.osgi.extender:1.2.1]
at java.lang.Thread.run(Thread.java:724)[:1.7.0_40]
2014-05-28 11:29:15,598 | INFO | tenderThread-270 | Server | ? ? | 53 - org.eclipse.jetty.util - 7.6.9.v20130131 | jetty-7.6.9.v20130131
2014-05-28 11:29:15,602 | WARN | tenderThread-270 | MBeanContainer | ? ? | 53 - org.eclipse.jetty.util - 7.6.9.v20130131 | bean: qtp1425958650{8<=0<=0/254,-1}

maybe it's the similar issue like in https://issues.apache.org/jira/browse/CXF-4878.
There is mentioned that in jetty 8.1.14 this problem is solved.
kind regards,
soilworker

Getting Error com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure

I have some data migration scripts ( shell scripts generated from talend data migration tool) which connects to MySQL and perform some operations.
One of the script is performs heavy calculations and make lockups from when i execute it on my local machine it completes in around 2.5 hours,and the connection made to MySQL stays in sleep mode
From MySQL Processlist
mysql> show processlist;
+-------+------+---------------------+-------------------+---------+------+-------+------------------+
| Id | User | Host | db | Command | Time | State | Info |
+-------+------+---------------------+-------------------+---------+------+-------+------------------+
| 10631 | root | localhost | psdata_psdatabase | Sleep | 18 | | NULL |
| 11195 | root | localhost | psdata_psdatabase | Sleep | 5497 | | NULL |
| 11261 | root | localhost | psdata_psdatabase | Query | 0 | NULL | show processlist |
| 11492 | root | 192.168.9.213:56507 | psdata_psdatabase | Sleep | 5509 | | NULL |
| 11493 | root | 192.168.9.213:56508 | psdata_psdatabase | Sleep | 5508 | | NULL |
+-------+------+---------------------+-------------------+---------+------+-------+------------------+
5 rows in set (0.00 sec)
The Threads from 192.168.9.213 are of that script.
But when i execute same script on production/staging, I am getting error after around 1 hour, And I also don't see any activity in MySQL Processlist in that one hour as there were connections in sleep mode on my local machine
"com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure"
Stack Trace
[root#host5 /home/talend/PharmaSecure_psData_localhost/execute_analysis_jobs]# sh execute_analysis_jobs_run.sh
Analysis Started
Started psVerify_interaction_analysis
Ended psVerify_interaction_analysis
Started psVerify_interaction_analysis_p2
Exception in component tMysqlOutput_1
com.mysql.jdbc.exceptions.jdbc4.CommunicationsException: Communications link failure
The last packet successfully received from the server was 3,350,869 milliseconds ago. The last packet sent successfully to the server was 31 milliseconds ago.
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:525)
at com.mysql.jdbc.Util.handleNewInstance(Util.java:411)
at com.mysql.jdbc.SQLError.createCommunicationsException(SQLError.java:1117)
at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3851)
at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:2471)
at com.mysql.jdbc.MysqlIO.disableMultiQueries(MysqlIO.java:3771)
at com.mysql.jdbc.PreparedStatement.executePreparedBatchAsMultiStatement(PreparedStatement.java:1675)
at com.mysql.jdbc.PreparedStatement.executeBatch(PreparedStatement.java:1463)
at pharmasecure_ps.psverify_interaction_analysis_p2_0_1.psVerify_interaction_analysis_p2.tMysqlInput_1Process(psVerify_interaction_analysis_p2.java:3576)
at pharmasecure_ps.psverify_interaction_analysis_p2_0_1.psVerify_interaction_analysis_p2.tMysqlInput_6Process(psVerify_interaction_analysis_p2.java:1196)
at pharmasecure_ps.psverify_interaction_analysis_p2_0_1.psVerify_interaction_analysis_p2.tJava_1Process(psVerify_interaction_analysis_p2.java:687)
at pharmasecure_ps.psverify_interaction_analysis_p2_0_1.psVerify_interaction_analysis_p2.runJobInTOS(psVerify_interaction_analysis_p2.java:7365)
at pharmasecure_ps.psverify_interaction_analysis_p2_0_1.psVerify_interaction_analysis_p2.runJob(psVerify_interaction_analysis_p2.java:7207)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tRunJob_1Process(psVerify_interaction_analysis.java:4911)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tJava_2Process(psVerify_interaction_analysis.java:4806)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_8Process(psVerify_interaction_analysis.java:4719)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_6Process(psVerify_interaction_analysis.java:2821)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_5Process(psVerify_interaction_analysis.java:1541)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_9Process(psVerify_interaction_analysis.java:6433)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tJava_1Process(psVerify_interaction_analysis.java:5924)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.runJobInTOS(psVerify_interaction_analysis.java:6652)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.runJob(psVerify_interaction_analysis.java:6494)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_4Process(execute_analysis_jobs.java:1174)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_1Process(execute_analysis_jobs.java:838)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tJava_1Process(execute_analysis_jobs.java:682)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.runJobInTOS(execute_analysis_jobs.java:2749)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.main(execute_analysis_jobs.java:2596)
Caused by: java.net.SocketException: Broken pipe
at java.net.SocketOutputStream.socketWrite0(Native Method)
at java.net.SocketOutputStream.socketWrite(SocketOutputStream.java:109)
at java.net.SocketOutputStream.write(SocketOutputStream.java:153)
at java.io.BufferedOutputStream.flushBuffer(BufferedOutputStream.java:82)
at java.io.BufferedOutputStream.flush(BufferedOutputStream.java:140)
at com.mysql.jdbc.MysqlIO.send(MysqlIO.java:3832)
... 23 more
Exception in component tRunJob_1
java.lang.RuntimeException: Child job running failed
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tRunJob_1Process(psVerify_interaction_analysis.java:4932)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tJava_2Process(psVerify_interaction_analysis.java:4806)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_8Process(psVerify_interaction_analysis.java:4719)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_6Process(psVerify_interaction_analysis.java:2821)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_5Process(psVerify_interaction_analysis.java:1541)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tMysqlInput_9Process(psVerify_interaction_analysis.java:6433)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.tJava_1Process(psVerify_interaction_analysis.java:5924)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.runJobInTOS(psVerify_interaction_analysis.java:6652)
at pharmasecure_ps.psverify_interaction_analysis_0_1.psVerify_interaction_analysis.runJob(psVerify_interaction_analysis.java:6494)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_4Process(execute_analysis_jobs.java:1174)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_1Process(execute_analysis_jobs.java:838)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tJava_1Process(execute_analysis_jobs.java:682)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.runJobInTOS(execute_analysis_jobs.java:2749)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.main(execute_analysis_jobs.java:2596)
Exception in component tRunJob_4
java.lang.RuntimeException: Child job running failed
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_4Process(execute_analysis_jobs.java:1195)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_1Process(execute_analysis_jobs.java:838)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tJava_1Process(execute_analysis_jobs.java:682)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.runJobInTOS(execute_analysis_jobs.java:2749)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.main(execute_analysis_jobs.java:2596)
Exception in component tSendMail_2
javax.mail.AuthenticationFailedException: failed to connect
at javax.mail.Service.connect(Service.java:322)
at javax.mail.Service.connect(Service.java:172)
at javax.mail.Service.connect(Service.java:121)
at javax.mail.Transport.send0(Transport.java:190)
at javax.mail.Transport.send(Transport.java:120)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tSendMail_2Process(execute_analysis_jobs.java:1433)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_4_onSubJobError(execute_analysis_jobs.java:508)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.tRunJob_4_error(execute_analysis_jobs.java:384)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:601)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs$TalendException.printStackTrace(execute_analysis_jobs.java:330)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs$TalendException.printStackTrace(execute_analysis_jobs.java:318)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs$TalendException.printStackTrace(execute_analysis_jobs.java:318)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.runJobInTOS(execute_analysis_jobs.java:2755)
at pharmasecure_ps.execute_analysis_jobs_0_1.execute_analysis_jobs.main(execute_analysis_jobs.java:2596)

Check the value of the wait_timeout variable on your mysql servers.
The value of the variable could be too low on your production server.
To show the value type this command :
SHOW VARIABLES LIKE 'wait_timeout'
Set the same value in your local server as the production to see if you can reproduce the problem.
If the problem can be reproduced, you may have to increase the value of the wait_timeout on your production server.
http://dev.mysql.com/doc/refman/5.0/en/server-system-variables.html#sysvar_wait_timeout