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Maven build jar with local dependencies

I want to build a jar including all dependencies with the maven-assembly-plugin.
I implemented some dependencies from the maven repository which works fine BUT I also implemented local dependencies and when running the jar I get NoClassDefFoundError.
I think that maven does not include the local dependencies to the jar.
I have a lot of local dependencies which I need to use and it would be a lot of work to install all of them manually. It would be the easiest way if it would be possible to inculde them like a path.
This is my pom.xml
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>-</groupId>
<artifactId>-</artifactId>
<version>1.0-SNAPSHOT</version>
<name>-</name>
<!-- FIXME change it to the project's website -->
<url>http://www.example.com</url>
<properties>
<project.build.sourceEncoding>ISO-8859-1</project.build.sourceEncoding>
<maven.compiler.source>8</maven.compiler.source>
<maven.compiler.target>8</maven.compiler.target>
</properties>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.11</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>bosch</groupId>
<artifactId>jdatepicker</artifactId>
<version>1.3.2</version>
<scope>system</scope>
<systemPath>${basedir}/localLibraries/jdatepicker-1.3.2.jar</systemPath>
</dependency>
.
.
.
</dependencies>
<build>
<pluginManagement><!-- lock down plugins versions to avoid using Maven defaults (may be moved to parent pom) -->
<plugins>
<plugin>
<artifactId>maven-assembly-plugin</artifactId>
<configuration>
<archive>
<manifest>
<mainClass>engine.RQ1Tools</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
<executions>
<execution>
<id>make-assembly</id> <!-- this is used for inheritance merges -->
<phase>package</phase> <!-- bind to the packaging phase -->
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.openjfx</groupId>
<artifactId>javafx-maven-plugin</artifactId>
<version>0.0.8</version>
<configuration>
<mainClass>HelloFX</mainClass>
</configuration>
</plugin>
<!-- clean lifecycle, see https://maven.apache.org/ref/current/maven-core/lifecycles.html#clean_Lifecycle -->
<plugin>
<artifactId>maven-clean-plugin</artifactId>
<version>3.1.0</version>
</plugin>
<!-- default lifecycle, jar packaging: see https://maven.apache.org/ref/current/maven-core/default-bindings.html#Plugin_bindings_for_jar_packaging -->
<plugin>
<artifactId>maven-resources-plugin</artifactId>
<version>3.0.2</version>
</plugin>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.8.0</version>
</plugin>
<plugin>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.22.1</version>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<version>3.0.2</version>
</plugin>
<plugin>
<artifactId>maven-install-plugin</artifactId>
<version>2.5.2</version>
</plugin>
<plugin>
<artifactId>maven-deploy-plugin</artifactId>
<version>2.8.2</version>
</plugin>
<!-- site lifecycle, see https://maven.apache.org/ref/current/maven-core/lifecycles.html#site_Lifecycle -->
<plugin>
<artifactId>maven-site-plugin</artifactId>
<version>3.7.1</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-release-plugin</artifactId>
<version>3.0.0-M6</version>
<configuration>
<tagNameFormat>v#{project.version}</tagNameFormat>
</configuration>
</plugin>
<plugin>
<artifactId>maven-project-info-reports-plugin</artifactId>
<version>3.0.0</version>
</plugin>
</plugins>
</pluginManagement>
</build>
</project>
Thank you for helping :)

How do I work correctly with profiles, classifiers and modules in Maven?

I'm trying to create a Maven configuration that supports the same code for two different environments. One environment is Java 6 with Seam, the other is Java 7 with JEE.
My project is a multi module project with a parent pom where I've configured two profiles. The interesting parts in the parent pom:
<profiles>
<profile>
<id>JDK7</id>
<properties>
<jdk.version>1.7</jdk.version>
<profile.classifier>with-beans-xml</profile.classifier>
</properties>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.3</version>
<configuration>
<source>${jdk.version}</source>
<target>${jdk.version}</target>
<encoding>${project.build.sourceEncoding}</encoding>
</configuration>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<version>2.4</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>jar</goal>
</goals>
<configuration>
<classifier>${profile.classifier}</classifier>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>JDK6</id>
<properties>
<jdk.version>1.6</jdk.version>
<profile.classifier>without-beans-xml</profile.classifier>
</properties>
<!-- Identical parts left out for brevity -->
<build>
<plugins>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>jar</goal>
</goals>
<configuration>
<classifier>${profile.classifier}</classifier>
<excludes>
<exclude>src/main/resources/META-INF/beans.xml</exclude>
</excludes>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
</profile>
</profiles>
In a sub module of this pom I need to reference specific versions of other modules to be sure they are all using the same build version of Java and should contain or not contain beans.xml.
This is how I've done that:
<parent>
<groupId>commons</groupId>
<artifactId>parent-pom</artifactId>
<version>0.0.1-SNAPSHOT</version>
</parent>
<artifactId>some-module</artifactId>
<dependencies>
<dependency>
<groupId>commons</groupId>
<artifactId>core</artifactId>
<version>${project.version}</version>
<classifier>${profile.classifier}</classifier>
</dependency>
</dependencies>
The properties decalared above resolves just fine, but the dependency called core above contains references to other modules that contain the core functionality of the entire project.
The dependencies in core doesn't resolve when I import that module into other modules.
This is the dependency hierarchy I'm expecting:
- some-module
- core
- some-other-module
However, after adding core as a dependency to another module, I explicitly need to add some-other-module for it to be available too, i.e. some-other-module is not transitive from referencing core.
Am I going about this the wrong way? It works just fine with the different versions, just that I have to add them explicitly which I'd rather not to avoid confusion when other users are going to use this.
Updated
By request, here is the full parent pom and one of the modules that are experiencing the problems with transitive dependencies.
parent pom.xml
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>se.commons</groupId>
<artifactId>healthcheck-parent</artifactId>
<version>0.0.1-SNAPSHOT</version>
<packaging>pom</packaging>
<name>healthcheck-parent-pom</name>
<modules>
<module>healthcheck-core</module>
<module>healthcheck-xsd</module>
<module>healthcheck-jms</module>
<module>healthcheck-db</module>
<module>healthcheck-filesystem</module>
<module>healthcheck-http</module>
</modules>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<java.home>${JAVA_1_7_HOME}</java.home>
</properties>
<profiles>
<profile>
<id>JDK7</id>
<!-- <activation> -->
<!-- <activeByDefault>true</activeByDefault> -->
<!-- </activation> -->
<properties>
<!-- Build properties -->
<jdk.version>1.7</jdk.version>
<profile.classifier>with-beans-xml</profile.classifier>
<bom.version>2.0.0.R</bom.version>
</properties>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>se.commons</groupId>
<artifactId>bom</artifactId>
<version>${bom.version}</version>
<scope>import</scope>
<type>pom</type>
</dependency>
</dependencies>
</dependencyManagement>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.3</version>
<configuration>
<source>${jdk.version}</source>
<target>${jdk.version}</target>
<encoding>${project.build.sourceEncoding}</encoding>
</configuration>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<version>2.4</version>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>jar</goal>
</goals>
<configuration>
<classifier>${profile.classifier}</classifier>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>findbugs-maven-plugin</artifactId>
<version>3.0.1</version>
<configuration>
<effort>Default</effort>
<threshold>Default</threshold>
<xmlOutputDirectory>target/findbugs</xmlOutputDirectory>
<failOnError>true</failOnError>
<xmlOutput>true</xmlOutput>
<findbugsXmlOutput>true</findbugsXmlOutput>
<findbugsXmlWithMessages>true</findbugsXmlWithMessages>
<targetJdk>${jdk.version}</targetJdk>
<configuration>
<omitVisitors>FindReturnRef</omitVisitors>
</configuration>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.18.1</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-checkstyle-plugin</artifactId>
<version>2.15</version>
<executions>
<execution>
<goals>
<goal>checkstyle</goal>
</goals>
<phase>compile</phase>
</execution>
</executions>
<configuration>
<configLocation>${basedir}/../src/site/checkstyle.xml</configLocation>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-source-plugin</artifactId>
<version>2.2.1</version>
<executions>
<execution>
<id>attach-sources</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-javadoc-plugin</artifactId>
<version>2.8</version>
<executions>
<execution>
<id>attach-javadocs</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-site-plugin</artifactId>
<version>3.3</version>
<dependencies>
<dependency>
<!-- add support for ssh/scp -->
<groupId>org.apache.maven.wagon</groupId>
<artifactId>wagon-ssh</artifactId>
<version>2.4</version>
</dependency>
</dependencies>
<configuration>
<locales>sv</locales>
</configuration>
</plugin>
</plugins>
</build>
</profile>
<profile>
<id>JDK6</id>
<properties>
<!-- Build properties -->
<jdk.version>1.6</jdk.version>
<profile.classifier>without-beans-xml</profile.classifier>
<bom.version>2.0.0.R</bom.version>
</properties>
<dependencyManagement>
<dependencies>
<dependency>
<groupId>se.commons</groupId>
<artifactId>bom</artifactId>
<version>${bom.version}</version>
<scope>import</scope>
<type>pom</type>
</dependency>
</dependencies>
</dependencyManagement>
<build>
<resources>
<resource>
<directory>src/main/resources/META-INF</directory>
<excludes>
<exclude>beans.xml</exclude>
</excludes>
</resource>
</resources>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.3</version>
<configuration>
<source>${jdk.version}</source>
<target>${jdk.version}</target>
<encoding>${project.build.sourceEncoding}</encoding>
</configuration>
</plugin>
<plugin>
<artifactId>maven-jar-plugin</artifactId>
<executions>
<execution>
<phase>package</phase>
<goals>
<goal>jar</goal>
</goals>
<configuration>
<classifier>${profile.classifier}</classifier>
<excludes>
<exclude>src/main/resources/META-INF/beans.xml</exclude>
</excludes>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>findbugs-maven-plugin</artifactId>
<version>3.0.1</version>
<configuration>
<effort>Default</effort>
<threshold>Default</threshold>
<xmlOutputDirectory>target/findbugs</xmlOutputDirectory>
<failOnError>true</failOnError>
<xmlOutput>true</xmlOutput>
<findbugsXmlOutput>true</findbugsXmlOutput>
<findbugsXmlWithMessages>true</findbugsXmlWithMessages>
<targetJdk>${jdk.version}</targetJdk>
<configuration>
<omitVisitors>FindReturnRef</omitVisitors>
</configuration>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.18.1</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-checkstyle-plugin</artifactId>
<version>2.15</version>
<executions>
<execution>
<goals>
<goal>checkstyle</goal>
</goals>
<phase>compile</phase>
</execution>
</executions>
<configuration>
<configLocation>${basedir}/../src/site/checkstyle.xml</configLocation>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-source-plugin</artifactId>
<version>2.2.1</version>
<executions>
<execution>
<id>attach-sources</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-javadoc-plugin</artifactId>
<version>2.8</version>
<executions>
<execution>
<id>attach-javadocs</id>
<goals>
<goal>jar</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-site-plugin</artifactId>
<version>3.3</version>
<dependencies>
<dependency><!-- add support for ssh/scp -->
<groupId>org.apache.maven.wagon</groupId>
<artifactId>wagon-ssh</artifactId>
<version>2.4</version>
</dependency>
</dependencies>
<configuration>
<locales>sv</locales>
</configuration>
</plugin>
</plugins>
</build>
</profile>
</profiles>
<reporting>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-project-info-reports-plugin</artifactId>
<version>2.4</version>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-report-plugin</artifactId>
<version>2.18.1</version>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>findbugs-maven-plugin</artifactId>
<version>3.0.1</version>
<configuration>
<effort>Default</effort>
<threshold>Default</threshold>
<xmlOutputDirectory>target/findbugs</xmlOutputDirectory>
<failOnError>true</failOnError>
<xmlOutput>true</xmlOutput>
<findbugsXmlOutput>true</findbugsXmlOutput>
<findbugsXmlWithMessages>true</findbugsXmlWithMessages>
<targetJdk>${jdk.version}</targetJdk>
<configuration>
<omitVisitors>FindReturnRef</omitVisitors>
</configuration>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-pmd-plugin</artifactId>
<version>3.4</version>
<configuration>
<targetJdk>${jdk.version}</targetJdk>
</configuration>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>cobertura-maven-plugin</artifactId>
<version>2.7</version>
<reportSets>
<reportSet>
<reports>
<report>cobertura</report>
</reports>
</reportSet>
</reportSets>
<configuration>
<instrumentation>
</instrumentation>
<formats>
<format>xml</format>
<format>html</format>
</formats>
<instrumentation>
<includes>
<include>**/*.class</include>
</includes>
</instrumentation>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-javadoc-plugin</artifactId>
<version>2.8</version>
</plugin>
</plugins>
</reporting>
</project>
And here is one of the modules that use core as a dependency:
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>se.commons</groupId>
<artifactId>healthcheck-parent</artifactId>
<version>0.0.1-SNAPSHOT</version>
</parent>
<artifactId>healthcheck-jms</artifactId>
<dependencies>
<dependency>
<groupId>se.commons</groupId>
<artifactId>healthcheck-core</artifactId>
<version>${project.version}</version>
<classifier>${profile.classifier}</classifier>
</dependency>
<dependency>
<groupId>org.jboss.spec.javax.ejb</groupId>
<artifactId>jboss-ejb-api_3.1_spec</artifactId>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>org.jboss.spec.javax.jms</groupId>
<artifactId>jboss-jms-api_1.1_spec</artifactId>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>javax.enterprise</groupId>
<artifactId>cdi-api</artifactId>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-core</artifactId>
</dependency>
<dependency>
<groupId>org.testng</groupId>
<artifactId>testng</artifactId>
<scope>test</scope>
</dependency>
</dependencies>
</project>
And finally, here is the pom of core:
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>se.commons</groupId>
<artifactId>healthcheck-parent</artifactId>
<version>0.0.1-SNAPSHOT</version>
</parent>
<artifactId>healthcheck-core</artifactId>
<dependencies>
<dependency>
<groupId>se.commons</groupId>
<artifactId>healthcheck-xsd</artifactId>
<version>${project.version}</version>
<classifier>${profile.classifier}</classifier>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-core</artifactId>
</dependency>
<dependency>
<groupId>org.testng</groupId>
<artifactId>testng</artifactId>
<scope>test</scope>
</dependency>
</dependencies>
</project>

I finally gave up on the above solution after finding similar questions that never got a clear answer.
It doesn't seem to be possible to resolve transitive dependencies using a classifier, only the standard GAV.
I settled on a different artifactId to differentiate the projects instead.

Using poi-ooxml broke resource providing

I am trying to make jar file with external config files. Everything worked fine before using poi-ooxml library. After it I encounter problem with resource providing. I use next pom.xml:
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>xxx</groupId>
<artifactId>yyy</artifactId>
<version>0.1</version>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>2.6</version>
<configuration>
<archive>
<manifest>
<mainClass>zzz</mainClass>
</manifest>
<manifestEntries>
<Class-Path>./configs/</Class-Path>
</manifestEntries>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
<executions>
<execution>
<id>make-assembly</id>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<version>2.3</version>
<configuration>
<excludes>
<exclude>**/*.properties</exclude>
</excludes>
<archive>
<manifestEntries>
<Class-Path>configs/</Class-Path>
</manifestEntries>
</archive>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-resources-plugin</artifactId>
<version>2.3</version>
<executions>
<execution>
<id>copy-resources</id>
<phase>install</phase>
<goals>
<goal>copy-resources</goal>
</goals>
<configuration>
<outputDirectory>${basedir}/target/configs</outputDirectory>
<resources>
<resource>
<directory>src/main/resources</directory>
<includes>
<include>**/*.properties</include>
</includes>
</resource>
</resources>
</configuration>
</execution>
</executions>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>org.apache.poi</groupId>
<artifactId>poi-ooxml</artifactId>
<version>3.9</version>
</dependency>
<dependency>
<groupId>com.oracle</groupId>
<artifactId>ojdbc14</artifactId>
<version>10.2.0.3.0</version>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>RELEASE</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>xxx</groupId>
<artifactId>core</artifactId>
<version>LATEST</version>
</dependency>
</dependencies>
</project>
I failed on this line:
LogManager.getLogManager().readConfiguration(MethodHandles.lookup().lookupClass().getClassLoader().getResourceAsStream(fileName));
getResourceAsStream return null, but when I delete poi-ooxml dependency from pom file everything works fine.

The problem is in Apache Assembly plugin. Use Apache Shade plugin instead.
https://maven.apache.org/plugins/maven-shade-plugin/

Error: Could not find or load main class - how to compile to jar by maven?

I have problem with compiling classes to jar. When i do mvn package ant try to run it then i get error Could not find or load main class.
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.test</groupId>
<artifactId>JIRA-Re-Index</artifactId>
<version>1.0.0-SNAPSHOT</version>
<packaging>jar</packaging>
<name>JIRA-Re-Index</name>
<url>http://maven.apache.org</url>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>3.8.1</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>net.sourceforge.htmlunit</groupId>
<artifactId>htmlunit</artifactId>
<version>2.15</version>
</dependency>
<dependency>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
<version>1.2.17</version>
</dependency>
</dependencies>
<build>
<pluginManagement>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.1</version>
<configuration>
<source>1.7</source>
<target>1.7</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
<version>2.4</version>
<configuration>
<archive>
<manifest>
<mainClass>com.test.main.App</mainClass>
</manifest>
</archive>
<descriptorRefs>
<descriptorRef>jar-with-dependencies</descriptorRef>
</descriptorRefs>
</configuration>
<executions>
<execution>
<id>make-assembly</id>
<phase>package</phase>
<goals>
<goal>single</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</pluginManagement>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-assembly-plugin</artifactId>
</plugin>
</plugins>
</build>
</project>
What am I doing wrong? My main class is in src/main/java/com.test.main.App

You need maven-jar-plugin to help with that.
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-jar-plugin</artifactId>
<configuration>
<archive>
<manifest>
<mainClass>com.test.main.App</mainClass>
</manifest>
</archive>
</configuration>
</plugin>
Whereas maven-assembly-plugin is used for
The Assembly Plugin for Maven is primarily intended to allow users to aggregate the project output along with its dependencies, modules, site documentation, and other files into a single distributable archive.

Hope below link can help you.
main-class-in-the-manifest-of-my-generated-jar

How to configure aspectj in pom.xml?

In my project I use aspects for logging. When I use eclipse compiler, everything works OK, but I have some problems with Maven. No logs are displayed - aspects classes aren't "seen".
I've tried to google it, but apache tutorial isn't clear for me. Other tutorials are about spring.
What should I add to pom.xml?
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>Agent</groupId>
<artifactId>Agent</artifactId>
<version>0.0.1-SNAPSHOT</version>
<build>
<sourceDirectory>src</sourceDirectory>
<resources>
<resource>
<directory>src</directory>
<excludes>
<exclude>**/*.java</exclude>
</excludes>
</resource>
</resources>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>aspectj-maven-plugin</artifactId>
<version>1.3</version>
<configuration>
<complianceLevel>1.5</complianceLevel>
</configuration>
<executions>
</executions>
</plugin>
</plugins>
</build>
<dependencies>
<dependency>
<groupId>org.aspectj</groupId>
<artifactId>aspectjrt</artifactId>
<version>1.7.0</version>
</dependency>
</dependencies>
</project>

Try this.If u don't need spring
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>myproject</groupId>
<artifactId>aspectj-project</artifactId>
<version>0.0.1-SNAPSHOT</version>
<packaging>jar</packaging>
<dependencies>
<dependency>
<groupId>org.aspectj</groupId>
<artifactId>aspectjrt</artifactId>
<version>1.6.8</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>aspectj-maven-plugin</artifactId>
<executions>
<execution>
<goals>
<goal>compile</goal>
</goals>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</execution>
</executions>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>exec-maven-plugin</artifactId>
<executions>
<execution>
<goals>
<goal>java</goal>
</goals>
</execution>
</executions>
<configuration>
<mainclass>myproject.Main</mainClass>
</configuration>
</plugin>
</plugins>
</build>
</project>