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Java REST API, The request resource is not availabe / Servlet.init() for servlet [Java API] threw exception [duplicate]

Previously, when the project was on Tomcat 8 and Java 8, it was working fine, but after I migrated my project to Tomcat 9 and Java 10, it is giving me error as follows:
Oct 05, 2018 11:02:01 AM org.apache.catalina.core.ApplicationContext log
SEVERE: StandardWrapper.Throwable
java.lang.IllegalArgumentException
at jersey.repackaged.org.objectweb.asm.ClassReader.<init>(ClassReader.java:170)
at jersey.repackaged.org.objectweb.asm.ClassReader.<init>(ClassReader.java:153)
at jersey.repackaged.org.objectweb.asm.ClassReader.<init>(ClassReader.java:424)
at org.glassfish.jersey.server.internal.scanning.AnnotationAcceptingListener.process(AnnotationAcceptingListener.java:170)
at org.glassfish.jersey.server.ResourceConfig.scanClasses(ResourceConfig.java:915)
at org.glassfish.jersey.server.ResourceConfig._getClasses(ResourceConfig.java:869)
at org.glassfish.jersey.server.ResourceConfig.getClasses(ResourceConfig.java:775)
at org.glassfish.jersey.server.ResourceConfig$RuntimeConfig.<init>(ResourceConfig.java:1206)
at org.glassfish.jersey.server.ResourceConfig$RuntimeConfig.<init>(ResourceConfig.java:1178)
at org.glassfish.jersey.server.ResourceConfig.createRuntimeConfig(ResourceConfig.java:1174)
at org.glassfish.jersey.server.ApplicationHandler.<init>(ApplicationHandler.java:345)
at org.glassfish.jersey.servlet.WebComponent.<init>(WebComponent.java:392)
at org.glassfish.jersey.servlet.ServletContainer.init(ServletContainer.java:177)
at org.glassfish.jersey.servlet.ServletContainer.init(ServletContainer.java:369)
at javax.servlet.GenericServlet.init(GenericServlet.java:158)
at org.apache.catalina.core.StandardWrapper.initServlet(StandardWrapper.java:1124)
at org.apache.catalina.core.StandardWrapper.loadServlet(StandardWrapper.java:1079)
at org.apache.catalina.core.StandardWrapper.load(StandardWrapper.java:971)
at org.apache.catalina.core.StandardContext.loadOnStartup(StandardContext.java:4829)
at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5143)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1429)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1419)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.base/java.util.concurrent.AbstractExecutorService.submit(Unknown Source)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:944)
at org.apache.catalina.core.StandardHost.startInternal(StandardHost.java:839)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1429)
at org.apache.catalina.core.ContainerBase$StartChild.call(ContainerBase.java:1419)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at org.apache.tomcat.util.threads.InlineExecutorService.execute(InlineExecutorService.java:75)
at java.base/java.util.concurrent.AbstractExecutorService.submit(Unknown Source)
at org.apache.catalina.core.ContainerBase.startInternal(ContainerBase.java:944)
at org.apache.catalina.core.StandardEngine.startInternal(StandardEngine.java:261)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardService.startInternal(StandardService.java:422)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.core.StandardServer.startInternal(StandardServer.java:770)
at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:183)
at org.apache.catalina.startup.Catalina.start(Catalina.java:682)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
at java.base/java.lang.reflect.Method.invoke(Unknown Source)
at org.apache.catalina.startup.Bootstrap.start(Bootstrap.java:350)
at org.apache.catalina.startup.Bootstrap.main(Bootstrap.java:492)
My pom.xml file is:
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<groupId>com.BAE</groupId>
<artifactId>BAE</artifactId>
<version>1.0.1-SNAPSHOT</version>
<name>BAE Maven Webapp</name>
<url>http://maven.apache.org</url>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>3.8.1</version>
<scope>test</scope>
</dependency>
<!-- https://mvnrepository.com/artifact/org./mockito-all -->
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>1.9.5</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.testng</groupId>
<artifactId>testng</artifactId>
<version>6.14.3</version>
</dependency>
<!-- Servlet API -->
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>javax.servlet-api</artifactId>
<version>3.1.0</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>javax.mail</groupId>
<artifactId>mail</artifactId>
<version>1.4</version>
</dependency>
<dependency>
<groupId>commons-codec</groupId>
<artifactId>commons-codec</artifactId>
<version>1.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.inject/javax.inject -->
<dependency>
<groupId>javax.inject</groupId>
<artifactId>javax.inject</artifactId>
<version>1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.validation/validation-api -->
<dependency>
<groupId>javax.validation</groupId>
<artifactId>validation-api</artifactId>
<version>1.0.0.GA</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.json/javax.json-api -->
<dependency>
<groupId>javax.json</groupId>
<artifactId>javax.json-api</artifactId>
<version>1.0</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.ws.rs/javax.ws.rs-api -->
<dependency>
<groupId>javax.ws.rs</groupId>
<artifactId>javax.ws.rs-api</artifactId>
<version>2.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.jboss.interceptor/jboss-interceptor-api -->
<dependency>
<groupId>org.jboss.interceptor</groupId>
<artifactId>jboss-interceptor-api</artifactId>
<version>1.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/xerces/xercesImpl -->
<dependency>
<groupId>xerces</groupId>
<artifactId>xercesImpl</artifactId>
<version>2.8.0</version>
</dependency>
<!-- https://mvnrepository.com/artifact/commons-fileupload/commons-fileupload -->
<dependency>
<groupId>commons-fileupload</groupId>
<artifactId>commons-fileupload</artifactId>
<version>1.3</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.core/jackson-annotations -->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml/jackson-xml-databind -->
<!-- https://mvnrepository.com/artifact/io.swagger/swagger-models -->
<dependency>
<groupId>io.swagger</groupId>
<artifactId>swagger-models</artifactId>
<version>1.5.3</version>
</dependency>
<!-- https://mvnrepository.com/artifact/io.swagger/swagger-annotations -->
<dependency>
<groupId>io.swagger</groupId>
<artifactId>swagger-annotations</artifactId>
<version>1.5.0</version>
</dependency>
<!-- https://mvnrepository.com/artifact/io.swagger/swagger-jaxrs -->
<dependency>
<groupId>io.swagger</groupId>
<artifactId>swagger-jaxrs</artifactId>
<version>1.5.13</version>
</dependency>
<!-- https://mvnrepository.com/artifact/io.swagger/swagger-core -->
<dependency>
<groupId>io.swagger</groupId>
<artifactId>swagger-core</artifactId>
<version>1.5.20</version>
<exclusions>
<exclusion>
<groupId>javax.ws.rs</groupId>
<artifactId>jsr311-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-multipart</artifactId>
<version>2.25</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.core/jersey-client -->
<dependency>
<groupId>org.glassfish.jersey.core</groupId>
<artifactId>jersey-client</artifactId>
<version>2.25</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.core/jersey-server -->
<dependency>
<groupId>org.glassfish.jersey.core</groupId>
<artifactId>jersey-server</artifactId>
<version>2.25</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.containers/jersey-container-servlet-core -->
<dependency>
<groupId>org.glassfish.jersey.containers</groupId>
<artifactId>jersey-container-servlet-core</artifactId>
<version>2.25</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.containers/jersey-container-servlet -->
<dependency>
<groupId>org.glassfish.jersey.containers</groupId>
<artifactId>jersey-container-servlet</artifactId>
<version>2.25</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.microsoft.sqlserver/mssql-jdbc -->
<dependency>
<groupId>com.microsoft.sqlserver</groupId>
<artifactId>mssql-jdbc</artifactId>
<version>6.4.0.jre8</version>
</dependency>
<!-- https://mvnrepository.com/artifact/net.sourceforge.jtds/jtds -->
<dependency>
<groupId>net.sourceforge.jtds</groupId>
<artifactId>jtds</artifactId>
<version>1.3.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.media/jersey-media-json -->
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-json</artifactId>
<version>2.0-m05</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.glassfish.jersey.media/jersey-media-json-jackson -->
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-json-jackson</artifactId>
<version>2.26</version>
</dependency>
<dependency>
<groupId>javax.ws.rs</groupId>
<artifactId>jsr311-api</artifactId>
<version>1.1.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.jaxrs/jackson-jaxrs-json-provider -->
<dependency>
<groupId>com.fasterxml.jackson.jaxrs</groupId>
<artifactId>jackson-jaxrs-json-provider</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.jaxrs/jackson-jaxrs-base -->
<dependency>
<groupId>com.fasterxml.jackson.jaxrs</groupId>
<artifactId>jackson-jaxrs-base</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.dataformat/jackson-dataformat-yaml -->
<dependency>
<groupId>com.fasterxml.jackson.dataformat</groupId>
<artifactId>jackson-dataformat-yaml</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.dataformat/jackson-dataformat-xml -->
<dependency>
<groupId>com.fasterxml.jackson.dataformat</groupId>
<artifactId>jackson-dataformat-xml</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/com.fasterxml.jackson.datatype/jackson-datatype-joda -->
<dependency>
<groupId>com.fasterxml.jackson.datatype</groupId>
<artifactId>jackson-datatype-joda</artifactId>
<version>2.9.5</version>
</dependency>
<!-- https://mvnrepository.com/artifact/org.eclipse/yasson -->
<dependency>
<groupId>org.eclipse</groupId>
<artifactId>yasson</artifactId>
<version>1.0</version>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<finalName>BAE_4_4</finalName>
<sourceDirectory>src\main\java</sourceDirectory>
<testSourceDirectory>src/test</testSourceDirectory>
<resources>
<resource>
<directory>src</directory>
<excludes>
<exclude>**/*.java</exclude>
<exclude>main/**</exclude>
<exclude>test/**</exclude>
</excludes>
</resource>
</resources>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>3.5.1</version>
<configuration>
<source>1.8</source>
<target>1.8</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.14.1</version>
<configuration>
<!-- Suite testng xml file to consider for test execution -->
<suiteXmlFiles>
<suiteXmlFile>testng.xml</suiteXmlFile>
</suiteXmlFiles>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-eclipse-plugin</artifactId>
<version>2.9</version>
<configuration>
<!-- Always download and attach dependencies source code -->
<downloadSources>true</downloadSources>
<downloadJavadocs>false</downloadJavadocs>
<!-- Avoid type mvn eclipse:eclipse -Dwtpversion=2.0 -->
<wtpversion>2.0</wtpversion>
</configuration>
</plugin>
<!-- For Maven Tomcat Plugin -->
<plugin>
<groupId>org.apache.tomcat.maven</groupId>
<artifactId>tomcat7-maven-plugin</artifactId>
<version>2.2</version>
<configuration>
<path>/BAE</path>
</configuration>
</plugin>
</plugins>
</build>
<packaging>war</packaging>
</project>
Above are all dependencies jar files which I used in Tomcat 8 and Java 8.
Can anyone suggest me what is the cause and solution for this issue?

tl;dr
To use Java 10, switch to Jersey 2.27 (which is the latest as of this date (10/5/18)).
java.lang.IllegalArgumentException
at jersey.repackaged.org.objectweb.asm.ClassReader.<init>
Jersey repackages asm and puts these class files into the jersey-server jar. Just digging through the jar in my IDE, I looked at the ClassReader constructor (that's what <init> means) to see where IllegalArgumentException is thrown. Note, I'm currently looking at Jersey version 2.25.1
public ClassReader(byte[] b, int off, int len) {
this.b = b;
if (this.readShort(off + 6) > 53) {
throw new IllegalArgumentException();
}
The 53 is the class file version. According to that link, 53 is for Java 9. So it appears Jersey 2.25.1 only supports up to Java 9. So I changed the Jersey dependency version to 2.26, and looked at the ClassReader constructor and it was exactly the same. So I switched to Jersey 2.27, and this is what I saw
public ClassReader(final byte[] b, final int off, final int len) {
this.b = b;
// checks the class version
// added "support" for java 11 compiled classes
if (readShort(off + 6) > Opcodes.V11) {
throw new IllegalArgumentException();
}
Notice the Opcodes.V11 (which I assume is Java 11). So it looks like for Java 10+ support, you must switch to Jersey 2.27, as also mentioned in this related issue
Update
After seeing your pom, you need to make sure you are changing the Jersey version on all your Jersey dependencies. And also you have so many unnecessary dependencies. The following are all you need. Remove anything else that has Jersey in the name.
KEEP THESE
Change to 2.27
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-multipart</artifactId>
<version>2.27</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.containers</groupId>
<artifactId>jersey-container-servlet</artifactId>
<version>2.27</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-json-jackson</artifactId>
<version>2.27</version>
</dependency>
REMOVE THESE
<dependency>
<groupId>javax.ws.rs</groupId>
<artifactId>javax.ws.rs-api</artifactId>
<version>2.1</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.core</groupId>
<artifactId>jersey-client</artifactId>
<version>2.25</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.core</groupId>
<artifactId>jersey-server</artifactId>
<version>2.25</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.containers</groupId>
<artifactId>jersey-container-servlet-core</artifactId>
<version>2.25</version>
</dependency>
<dependency>
<groupId>org.glassfish.jersey.media</groupId>
<artifactId>jersey-media-json</artifactId>
<version>2.0-m05</version>
</dependency>
<dependency>
<groupId>javax.ws.rs</groupId>
<artifactId>jsr311-api</artifactId>
<version>1.1.1</version>
</dependency>
ADD EXCLUSION
<dependency>
<groupId>io.swagger</groupId>
<artifactId>swagger-jaxrs</artifactId>
<version>1.5.13</version>
<exclusions>
<exclusion>
<groupId>javax.ws.rs</groupId>
<artifactId>jsr311-api</artifactId>
</exclusion>
</exclusions>
</dependency>
Asides
See the Jersey Migration Guide for some other issues you may face when migrating to version 2.27
The one for sure thing you will need if you are migrating from pre-2.26 is the jersey-hk2 dependency. See this post for why.
<dependency>
<groupId>org.glassfish.jersey.inject</groupId>
<artifactId>jersey-hk2</artifactId>
<version>2.27</version>
</dependency>

Unable to connect to Hibernate using MS SQL 2016

I'm trying launch my project configuration within Eclipse using Hibernate but keep running into this error:
org.hibernate.console.HibernateConsoleRuntimeException: Could not load AnnotationConfiguration
Could not load AnnotationConfiguration
org.hibernate.console.HibernateConsoleRuntimeException: Could not load AnnotationConfiguration
Could not load AnnotationConfiguration
org.hibernate.service.spi.ServiceException: Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment]
Unable to create requested service [org.hibernate.engine.jdbc.env.spi.JdbcEnvironment]
org.hibernate.boot.registry.classloading.spi.ClassLoadingException: Unable to load class [com.microsoft.sqlserver.jdbc.SQLServerDriver]
Unable to load class [com.microsoft.sqlserver.jdbc.SQLServerDriver]
java.lang.ClassNotFoundException: Could not load requested class : com.microsoft.sqlserver.jdbc.SQLServerDriver
Could not load requested class : com.microsoft.sqlserver.jdbc.SQLServerDriver
My Hibernate Config file:
<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE hibernate-configuration SYSTEM
"classpath://org/hibernate/hibernate-configuration-3.0.dtd">
<hibernate-configuration>
<session-factory>
<property name="hibernate.connection.driver_class">
com.microsoft.sqlserver.jdbc.SQLServerDriver</property>
<property name="connection.url">jdbc:microsoft:sqlserver://localhost:1234/databaseName=EX</property>
<property name="connection.pool_size">10</property>
<property name="hibernate.connection.username">EX</property>
<property name="hibernate.connection.password">Test</property>
<property name="hibernate.default_catalog">EX</property>
<property name="hibernate.default_schema">dbo</property>
<property name="hibernate.dialect">org.hibernate.dialect.SQLServerDialect</property>
</session-factory>
</hibernate-configuration>
Also, here is my pom.xml file:
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<!-- NOTE: This is an incomplete pom. It is here to define dependencies.
The project uses Apache Ant to build and deploy. -->
<groupId>test.org</groupId>
<artifactId>mExample</artifactId>
<name>Mobile-Friendly Example Application</name>
<version>1.0.0-BUILD-SNAPSHOT</version>
<!-- <packaging>war</packaging> -->
<properties>
<java-version>1.8</java-version>
<org.springframework-version>5.0.4.RELEASE</org.springframework-version>
<org.aspectj-version>1.7.4</org.aspectj-version>
<!-- NOTE: do not use Hibernate 5.2.x: broken JTA transaction management -->
<hibernate.version>5.1.13.Final</hibernate.version>
<hibernate.validator>5.4.1.Final</hibernate.validator>
<c3p0.version>0.9.5.2</c3p0.version>
<jackson.version>2.9.4</jackson.version>
<project.buildDeploymentPath>C:/usr/local/jboss/standalone/deployments/</project.buildDeploymentPath>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<!--
<dependency>
<groupId>test.org.common</groupId>
<artifactId>adt-common</artifactId>
<version>1.10</version>
</dependency>
-->
<!-- Spring -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-webmvc</artifactId>
<version>${org.springframework-version}</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-orm</artifactId>
<version>${org.springframework-version}</version>
</dependency>
<!-- Hibernate -->
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-core</artifactId>
<version>${hibernate.version}</version>
</dependency>
<dependency>
<groupId>org.hibernate.common</groupId>
<artifactId>hibernate-commons-annotations</artifactId>
<version>5.0.2.Final</version>
</dependency>
<!-- Hibernate Validator -->
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-validator</artifactId>
<version>${hibernate.validator}</version>
</dependency>
<!-- JSTL -->
<dependency>
<groupId>org.apache.taglibs</groupId>
<artifactId>taglibs-standard-impl</artifactId>
<version>1.2.5</version>
</dependency>
<!-- AspectJ -->
<dependency>
<groupId>org.aspectj</groupId>
<artifactId>aspectjrt</artifactId>
<version>${org.aspectj-version}</version>
</dependency>
<!-- Faster XML -->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
<version>${jackson.version}</version>
</dependency>
<!-- #Inject -->
<dependency>
<groupId>javax.inject</groupId>
<artifactId>javax.inject</artifactId>
<version>1</version>
</dependency>
<!-- Dependencies provided by WildFly A/S -->
<dependency>
<groupId>antlr</groupId>
<artifactId>antlr</artifactId>
<version>2.7.7</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>commons-beanutils</groupId>
<artifactId>commons-beanutils</artifactId>
<version>1.8.3</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>commons-logging</groupId>
<artifactId>commons-logging</artifactId>
<version>1.1.1</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
<version>2.5</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>javax.servlet.jsp</groupId>
<artifactId>jsp-api</artifactId>
<version>2.2</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>net.sourceforge.jtds</groupId>
<artifactId>jtds</artifactId>
<version>1.3.1</version>
<scope>provided</scope>
</dependency>
<!-- scope compile = test + provided -->
<dependency>
<groupId>log4j</groupId>
<artifactId>log4j</artifactId>
<version>1.2.17</version>
<scope>compile</scope>
</dependency>
<!-- Dependencies for unit tests -->
<dependency>
<groupId>commons-dbcp</groupId>
<artifactId>commons-dbcp</artifactId>
<version>1.4</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>commons-pool</groupId>
<artifactId>commons-pool</artifactId>
<version>1.3</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.bouncycastle</groupId>
<artifactId>bcprov-jdk15on</artifactId>
<version>1.57</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>commons-codec</groupId>
<artifactId>commons-codec</artifactId>
<version>1.10</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>4.11</version>
<scope>test</scope>
<exclusions>
<exclusion>
<artifactId>hamcrest-core</artifactId>
<groupId>org.hamcrest</groupId>
</exclusion>
</exclusions>
</dependency>
<!-- https://mvnrepository.com/artifact/org.hamcrest/hamcrest-library -->
<dependency>
<groupId>org.hamcrest</groupId>
<artifactId>hamcrest-library</artifactId>
<version>1.3</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-core</artifactId>
<version>1.9.5</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-test</artifactId>
<version>3.2.3.RELEASE</version>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.3.2</version>
<configuration>
<source>${java-version}</source>
<target>${java-version}</target>
</configuration>
</plugin>
</plugins>
</build>
<!-- <build> <plugins> <plugin> <artifactId>maven-eclipse-plugin</artifactId>
<version>2.9</version> <configuration> <additionalProjectnatures> <projectnature>org.springframework.ide.eclipse.core.springnature</projectnature>
</additionalProjectnatures> <additionalBuildcommands> <buildcommand>org.springframework.ide.eclipse.core.springbuilder</buildcommand>
</additionalBuildcommands> <downloadSources>true</downloadSources> <downloadJavadocs>true</downloadJavadocs>
</configuration> </plugin> <plugin> <groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId> <version>2.5.1</version> <configuration>
<source>${java-version}</source> <target>${java-version}</target> <compilerArgument>-Xlint:all</compilerArgument>
</configuration> </plugin> <plugin> <groupId>org.codehaus.mojo</groupId>
<artifactId>exec-maven-plugin</artifactId> <version>1.2.1</version> <configuration>
<mainClass>org.test.int1.Main</mainClass> </configuration> </plugin> <plugin>
<groupId>org.apache.maven.plugins</groupId> <artifactId>maven-war-plugin</artifactId>
<configuration> <outputDirectory>${project.buildDeploymentPath}</outputDirectory>
</configuration> </plugin> </plugins> <finalName>${project.artifactId}</finalName>
</build> -->
</project>
Keep getting repeat 'Could not load AnnotationConfiguration' error. I have tried everything and have exhausted every resource known possible, so any help or guidance is greatly appreciated!

I don't see a jdbc driver in the dependencies. For example:
<dependency>
<groupId>com.microsoft.sqlserver</groupId>
<artifactId>mssql-jdbc</artifactId>
<version>7.0.0.jre10</version>
</dependency>

What is the meaning of "The package is inside a non-bundle dependency" warning in a Maven project?

I encountered the warning when I imported my Maven project in IntelliJ:
The package 'org.xml.sax' is inside a non-bundle dependency
There are, in fact, 3 packages causing this: org.xml.sax, javax.servlet, and javax.xml.parsers. I have checked pom.xml and these packages weren't there except for javax.servlet.
Do I need to add the missing packages to the pom.xml? The program works but it would be better to get rid of this warning. I would also like to know if there are any expected problems when this warning is present.
This is the project's pom.xml
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<parent>
<groupId>com.project.name</groupId>
<artifactId>project-name</artifactId>
<version>1.1.0-SNAPSHOT</version>
<relativePath>../pom.xml</relativePath>
</parent>
<packaging>bundle</packaging>
<name>Project Name</name>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>${java.version}</source>
<target>${java.version}</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-scr-plugin</artifactId>
</plugin>
<plugin>
<groupId>org.apache.felix</groupId>
<artifactId>maven-bundle-plugin</artifactId>
<extensions>true</extensions>
<configuration>
<instructions>
<Embed-Dependency>jackson-core, jackson-annotations, jackson-databind, handlebars, antlr4-runtime, rhino, jsoup, commons-csv, jose4j</Embed-Dependency>
<Export-Package>com.project.name.core.*, com.fasterxml.jackson.core.*, com.fasterxml.jackson.annotation.*, com.fasterxml.jackson.databind.*,</Export-Package>
<Sling-Model-Packages>com.project.name.core</Sling-Model-Packages>
</instructions>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
</plugin>
<plugin>
<groupId>org.codehaus.mojo</groupId>
<artifactId>cobertura-maven-plugin</artifactId>
<version>2.7</version>
<configuration>
<check>
<branchRate>85</branchRate>
<lineRate>85</lineRate>
<haltOnFailure>false</haltOnFailure>
<totalBranchRate>85</totalBranchRate>
<totalLineRate>85</totalLineRate>
<packageLineRate>85</packageLineRate>
<packageBranchRate>85</packageBranchRate>
</check>
</configuration>
<executions>
<execution>
<goals>
<goal>clean</goal>
<goal>check</goal>
</goals>
</execution>
</executions>
</plugin>
</plugins>
</build>
<profiles>
<profile>...</profile>
</profiles>
<dependencies>
<!-- the core, which includes Streaming API, shared low-level abstractions
(but NOT data-binding) -->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-core</artifactId>
</dependency>
<!-- Just the annotations; use this dependency if you want to attach
annotations to classes without connecting them to the code. -->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-annotations</artifactId>
</dependency>
<!-- databinding; ObjectMapper, JsonNode and related classes are here -->
<dependency>
<groupId>com.fasterxml.jackson.core</groupId>
<artifactId>jackson-databind</artifactId>
</dependency>
<!-- CSV Parser -->
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-csv</artifactId>
<version>1.4</version>
</dependency>
<!-- OSGi Dependencies -->
<dependency>
<groupId>org.apache.felix</groupId>
<artifactId>org.apache.felix.scr</artifactId>
</dependency>
<dependency>
<groupId>org.apache.felix</groupId>
<artifactId>org.apache.felix.scr.annotations</artifactId>
</dependency>
<dependency>
<groupId>biz.aQute</groupId>
<artifactId>bndlib</artifactId>
</dependency>
<dependency>
<groupId>org.osgi</groupId>
<artifactId>org.osgi.core</artifactId>
</dependency>
<dependency>
<groupId>org.osgi</groupId>
<artifactId>org.osgi.compendium</artifactId>
</dependency>
<!-- Other Dependencies -->
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
</dependency>
<dependency>
<groupId>javax.jcr</groupId>
<artifactId>jcr</artifactId>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
</dependency>
<dependency>
<groupId>com.adobe.aem</groupId>
<artifactId>aem-api</artifactId>
</dependency>
<dependency>
<groupId>com.project.name</groupId>
<artifactId>core</artifactId>
<version>${project.version}</version>
</dependency>
<dependency>
<groupId>org.apache.sling</groupId>
<artifactId>org.apache.sling.models.api</artifactId>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-lang3</artifactId>
</dependency>
<!-- Testing -->
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
</dependency>
<dependency>
<groupId>junit-addons</groupId>
<artifactId>junit-addons</artifactId>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-simple</artifactId>
</dependency>
<dependency>
<groupId>commons-io</groupId>
<artifactId>commons-io</artifactId>
<version>2.4</version>
</dependency>
<dependency>
<groupId>org.apache.commons</groupId>
<artifactId>commons-pool2</artifactId>
</dependency>
<dependency>
<groupId>org.apache.sling</groupId>
<artifactId>org.apache.sling.i18n</artifactId>
</dependency>
<dependency>
<groupId>com.github.jknack</groupId>
<artifactId>handlebars</artifactId>
<version>4.0.1</version>
</dependency>
<dependency>
<groupId>org.mozilla</groupId>
<artifactId>rhino</artifactId>
<version>1.7R4</version>
</dependency>
<dependency>
<groupId>org.antlr</groupId>
<artifactId>antlr4-runtime</artifactId>
<version>4.5.1-1</version>
<exclusions>
<exclusion>
<groupId>org.abego.treelayout</groupId>
<artifactId>org.abego.treelayout.core</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.apache.sling</groupId>
<artifactId>org.apache.sling.commons.json</artifactId>
<version>2.0.10</version>
</dependency>
<dependency>
<groupId>org.jsoup</groupId>
<artifactId>jsoup</artifactId>
<version>1.8.3</version>
</dependency>
<dependency>
<groupId>org.jasypt</groupId>
<artifactId>jasypt</artifactId>
<version>1.9.2</version>
</dependency>
<dependency>
<groupId>org.bitbucket.b_c</groupId>
<artifactId>jose4j</artifactId>
<version>0.5.6</version>
</dependency>
<dependency>
<groupId>commons-httpclient</groupId>
<artifactId>commons-httpclient</artifactId>
<version>3.1</version>
</dependency>
<!-- https://mvnrepository.com/artifact/javax.mail/mail -->
<dependency>
<groupId>javax.mail</groupId>
<artifactId>mail</artifactId>
<version>1.4</version>
</dependency>
</dependencies>
</project>

google app engine with struts2, spring and JPA using maven

I am trying to create an application on google app engine using Struts2, Spring and JPA to connect to appengine datastore.
I have created a maven project and I am able to configure struts2 and spring properly but whenever i try to connect to appengine non-relation database I get the below mentioned error
could not resolve type: javax.persistence.Persistence
My pom file is as below
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<packaging>war</packaging>
<version>1.0-SNAPSHOT</version>
<groupId>com.sis.rho</groupId>
<artifactId>rho_v1.0</artifactId>
<properties>
<appengine.app.version>1</appengine.app.version>
<appengine.target.version>1.8.3</appengine.target.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<!-- Compile/runtime dependencies -->
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-1.0-sdk</artifactId>
<version>${appengine.target.version}</version>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
<version>2.5</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>jstl</groupId>
<artifactId>jstl</artifactId>
<version>1.2</version>
</dependency>
<!-- Test Dependencies -->
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-testing</artifactId>
<version>${appengine.target.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-stubs</artifactId>
<version>${appengine.target.version}</version>
<scope>test</scope>
</dependency>
<!-- Struts 2 -->
<dependency>
<groupId>org.apache.struts</groupId>
<artifactId>struts2-core</artifactId>
<version>2.1.8</version>
</dependency>
<!-- Spring framework -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring</artifactId>
<version>2.5.6</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-web</artifactId>
<version>2.5.6</version>
</dependency>
<!-- Struts 2 + Spring plugins -->
<dependency>
<groupId>org.apache.struts</groupId>
<artifactId>struts2-spring-plugin</artifactId>
<version>2.1.8</version>
</dependency>
<!-- Javax persistence -->
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-core</artifactId>
<!-- version>3.1.0-m3</version -->
<version>[3.1.1, 3.2)</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-enhancer</artifactId>
<version>[3.1.0-release, )</version>
<scope>compile</scope>
</dependency>
<dependency>
<groupId>org.apache.geronimo.specs</groupId>
<artifactId>geronimo-jpa_2.0_spec</artifactId>
<version>1.1</version>
<optional>true</optional>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-api-jpa</artifactId>
<version>[3.1.1, 3.2)</version>
<optional>true</optional>
</dependency>
<dependency>
<groupId>com.google.appengine.orm</groupId>
<artifactId>datanucleus-appengine</artifactId>
<version>2.1.1</version>
</dependency>
<!-- for log4J -->
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>jcl-over-slf4j</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
<version>1.6.1</version>
</dependency>
<!-- struts 2 velocity dependency -->
<dependency>
<groupId>org.apache.velocity</groupId>
<artifactId>velocity</artifactId>
<version>1.6.2</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<version>2.5.1</version>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<version>2.3</version>
<configuration>
<archiveClasses>true</archiveClasses>
<webResources>
<!-- in order to interpolate version from pom into appengine-web.xml -->
<resource>
<directory>${basedir}/src/main/webapp/WEB-INF</directory>
<filtering>true</filtering>
<targetPath>WEB-INF</targetPath>
</resource>
</webResources>
</configuration>
</plugin>
<plugin>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-maven-plugin</artifactId>
<version>${appengine.target.version}</version>
<configuration>
<enableJarClasses>false</enableJarClasses>
<jvmFlags>
<jvmFlag>-Xdebug</jvmFlag>
<jvmFlag>-Xrunjdwp:transport=dt_socket,address=8080,server=y,suspend=y</jvmFlag>
</jvmFlags>
<disableUpdateCheck>true</disableUpdateCheck>
</configuration>
</plugin>
</plugins>
</build>
I have checked a lot of threads discussing similar issues (sample) but none of the fixes provided are able to solve my issue. I included nearly all the dependencies but none worked.
Please help

issue was fixed once i removed optional from geronimo
i am able to run a GAE application with JPA :)
My latest POM where its working is below
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
<modelVersion>4.0.0</modelVersion>
<packaging>war</packaging>
<version>1.0-SNAPSHOT</version>
<groupId>com.sis.rho</groupId>
<artifactId>rho_v1.0</artifactId>
<properties>
<appengine.app.version>1</appengine.app.version>
<appengine.target.version>1.8.3</appengine.target.version>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
</properties>
<dependencies>
<!-- Compile/runtime dependencies -->
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-1.0-sdk</artifactId>
<version>${appengine.target.version}</version>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
<version>2.5</version>
<scope>provided</scope>
</dependency>
<dependency>
<groupId>jstl</groupId>
<artifactId>jstl</artifactId>
<version>1.2</version>
</dependency>
<!-- Test Dependencies -->
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-testing</artifactId>
<version>${appengine.target.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-stubs</artifactId>
<version>${appengine.target.version}</version>
<scope>test</scope>
</dependency>
<!-- Struts 2 -->
<dependency>
<groupId>org.apache.struts</groupId>
<artifactId>struts2-core</artifactId>
<version>2.1.8</version>
</dependency>
<!-- Spring framework -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring</artifactId>
<version>2.5.6</version>
</dependency>
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-web</artifactId>
<version>2.5.6</version>
</dependency>
<!-- Struts 2 + Spring plugins -->
<dependency>
<groupId>org.apache.struts</groupId>
<artifactId>struts2-spring-plugin</artifactId>
<version>2.1.8</version>
</dependency>
<!-- Javax persistence -->
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-core</artifactId>
<!-- version>3.1.0-m3</version -->
<version>3.1.1</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-enhancer</artifactId>
<version>3.1.0-release</version>
</dependency>
<dependency>
<groupId>org.apache.geronimo.specs</groupId>
<artifactId>geronimo-jpa_2.0_spec</artifactId>
<version>1.1</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-api-jpa</artifactId>
<version>3.1.1</version>
</dependency>
<dependency>
<groupId>com.google.appengine.orm</groupId>
<artifactId>datanucleus-appengine</artifactId>
<version>2.1.1</version>
</dependency>
<!-- for log4J -->
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>jcl-over-slf4j</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-log4j12</artifactId>
<version>1.6.1</version>
</dependency>
<!-- struts 2 velocity dependency -->
<dependency>
<groupId>org.apache.velocity</groupId>
<artifactId>velocity</artifactId>
<version>1.6.2</version>
</dependency>
</dependencies>
<build>
<plugins>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<version>2.5.1</version>
<artifactId>maven-compiler-plugin</artifactId>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<version>2.3</version>
<configuration>
<archiveClasses>true</archiveClasses>
<webResources>
<!-- in order to interpolate version from pom into appengine-web.xml -->
<resource>
<directory>${basedir}/src/main/webapp/WEB-INF</directory>
<filtering>true</filtering>
<targetPath>WEB-INF</targetPath>
</resource>
</webResources>
</configuration>
</plugin>
<plugin>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-maven-plugin</artifactId>
<version>${appengine.target.version}</version>
<configuration>
<enableJarClasses>false</enableJarClasses>
<jvmFlags>
<jvmFlag>-Xdebug</jvmFlag>
<jvmFlag>-Xrunjdwp:transport=dt_socket,address=8080,server=y,suspend=y</jvmFlag>
</jvmFlags>
<disableUpdateCheck>true</disableUpdateCheck>
</configuration>
</plugin>
</plugins>
</build>
</project>

Maven/GAE - Missing some Datanucleus classes

I have been struggling for hours trying to figure the good pom.xml out for my already existing GAE/J project.
Here is the "most working" version of my pom.xml (and it's probably terribly messy):
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd">
<modelVersion>4.0.0</modelVersion>
<!-- The Basics -->
<groupId>com.***</groupId>
<artifactId>***</artifactId>
<version>0.3-SNAPSHOT</version>
<packaging>war</packaging>
<name>***</name>
<properties>
<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
<downloadSources>true</downloadSources>
<!-- GAE SPECIFICS -->
<!-- Upload to http://test.latest.<applicationName>.appspot.com by default -->
<gae.application.version>test</gae.application.version>
<gae.version>1.6.1</gae.version>
<gae.sdk.version>1.6.1</gae.sdk.version>
<gae.port>8888</gae.port>
<datanucleus.gae.version>1.0.10</datanucleus.gae.version>
<datanucleus.version>3.0.5</datanucleus.version>
<!-- Web -->
<servlet.version>2.5</servlet.version>
<spring.version>3.0.5.RELEASE</spring.version>
<!-- Data -->
<jdo.version>2.3-ea</jdo.version>
<!-- Validation -->
<validation.version>1.0.0.GA</validation.version>
<hibernate.validator.version>4.2.0.Final</hibernate.validator.version>
<!-- Utils -->
<log.version>1.6.1</log.version>
<!-- Test -->
<mockito.version>1.8.5</mockito.version>
<junit.version>4.8.2</junit.version>
</properties>
<dependencies>
<!-- Google App Engine meta-package -->
<dependency>
<groupId>net.kindleit</groupId>
<artifactId>gae-runtime</artifactId>
<version>${gae.version}</version>
<type>pom</type>
</dependency>
<!-- Web -->
<dependency>
<groupId>org.springframework</groupId>
<artifactId>spring-webmvc</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.security</groupId>
<artifactId>spring-security-web</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.security</groupId>
<artifactId>spring-security-config</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>org.springframework.security</groupId>
<artifactId>spring-security-taglibs</artifactId>
<version>${spring.version}</version>
</dependency>
<dependency>
<groupId>javax.servlet</groupId>
<artifactId>servlet-api</artifactId>
<version>${servlet.version}</version>
<scope>provided</scope>
</dependency>
<!-- Data -->
<dependency>
<groupId>javax.jdo</groupId>
<artifactId>jdo2-api</artifactId>
<version>${jdo.version}</version>
<exclusions>
<exclusion>
<groupId>javax.transaction</groupId>
<artifactId>transaction-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-core</artifactId>
<version>${datanucleus.version}</version>
<scope>runtime</scope>
<exclusions>
<exclusion>
<groupId>javax.transaction</groupId>
<artifactId>transaction-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-api-jpa</artifactId>
<version>3.0.5</version>
</dependency>
<dependency>
<groupId>javax.transaction</groupId>
<artifactId>jta</artifactId>
<version>1.1</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-rdbms</artifactId>
<version>${datanucleus.version}</version>
</dependency>
<dependency>
<groupId>com.google.appengine.orm</groupId>
<artifactId>datanucleus-appengine</artifactId>
<version>1.0.10</version>
</dependency>
<dependency>
<groupId>org.apache.geronimo.specs</groupId>
<artifactId>geronimo-jpa_2.0_spec</artifactId>
<version>1.0</version>
</dependency>
<!-- Validation -->
<dependency>
<groupId>org.hibernate</groupId>
<artifactId>hibernate-validator</artifactId>
<version>${hibernate.validator.version}</version>
</dependency>
<dependency>
<groupId>javax.validation</groupId>
<artifactId>validation-api</artifactId>
<version>${validation.version}</version>
</dependency>
<dependency>
<groupId>javax.persistence</groupId>
<artifactId>persistence-api</artifactId>
<version>1.0</version>
</dependency>
<dependency>
<groupId>javax.transaction</groupId>
<artifactId>jta</artifactId>
<version>1.1</version>
</dependency>
<!-- J2EE Servlet API. We need it to compile IndexServlet class. You can
probably remove it, if you don't explicitly use Servlets -->
<dependency>
<groupId>org.apache.geronimo.specs</groupId>
<artifactId>geronimo-servlet_2.5_spec</artifactId>
<version>1.2</version>
<scope>provided</scope>
</dependency>
<!-- Make use of JSP tags. Remove, if you don't use JSPs -->
<dependency>
<artifactId>standard</artifactId>
<groupId>taglibs</groupId>
<version>1.1.2</version>
<type>jar</type>
<scope>runtime</scope>
</dependency>
<!-- These dependencies are here just for enabling logging -->
<dependency>
<groupId>org.slf4j</groupId>
<artifactId>slf4j-api</artifactId>
<version>1.6.1</version>
</dependency>
<dependency>
<groupId>ch.qos.logback</groupId>
<artifactId>logback-classic</artifactId>
<version>0.9.24</version>
</dependency>
<dependency>
<groupId>org.mockito</groupId>
<artifactId>mockito-all</artifactId>
<version>${mockito.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>junit</groupId>
<artifactId>junit</artifactId>
<version>${junit.version}</version>
<scope>test</scope>
</dependency>
<!-- GAE libraries for local testing as described here: http://code.google.com/appengine/docs/java/howto/unittesting.html -->
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-labs</artifactId>
<version>${gae.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-api-stubs</artifactId>
<version>${gae.version}</version>
<scope>test</scope>
</dependency>
<dependency>
<groupId>com.google.appengine</groupId>
<artifactId>appengine-testing</artifactId>
<version>${gae.version}</version>
<scope>test</scope>
</dependency>
</dependencies>
<build>
<plugins>
<!-- This plug-in "enhances" your domain model objects (i.e. makes them
persistent for datanucleus) -->
<plugin>
<groupId>org.datanucleus</groupId>
<artifactId>maven-datanucleus-plugin</artifactId>
<version>3.0.1</version>
<configuration>
<!-- Make sure this path contains your persistent classes! -->
<mappingIncludes>**/model/*.class</mappingIncludes>
<verbose>true</verbose>
<enhancerName>ASM</enhancerName>
<api>JPA</api>
</configuration>
<executions>
<execution>
<phase>compile</phase>
<goals>
<goal>enhance</goal>
</goals>
</execution>
</executions>
<dependencies>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-core</artifactId>
<version>${datanucleus.version}</version>
<exclusions>
<exclusion>
<groupId>javax.transaction</groupId>
<artifactId>transaction-api</artifactId>
</exclusion>
</exclusions>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-rdbms</artifactId>
<version>${datanucleus.version}</version>
</dependency>
<dependency>
<groupId>org.datanucleus</groupId>
<artifactId>datanucleus-enhancer</artifactId>
<version>3.0.1</version>
</dependency>
<dependency>
<groupId>javax.jdo</groupId>
<artifactId>jdo2-api</artifactId>
<version>${jdo.version}</version>
<scope>runtime</scope>
</dependency>
<dependency>
<groupId>javax.jdo</groupId>
<artifactId>jdo-api</artifactId>
<version>3.0</version>
</dependency>
</dependencies>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-war-plugin</artifactId>
<version>2.1-beta-1</version>
<configuration>
<webResources>
<resource>
<directory>src/main/webapp</directory>
<filtering>true</filtering>
<includes>
<include>**/appengine-web.xml</include>
</includes>
</resource>
</webResources>
</configuration>
</plugin>
<!-- The actual maven-gae-plugin. Type "mvn gae:run" to run project, "mvn
gae:deploy" to upload to GAE. -->
<plugin>
<groupId>net.kindleit</groupId>
<artifactId>maven-gae-plugin</artifactId>
<version>0.9.2</version>
<dependencies>
<dependency>
<groupId>net.kindleit</groupId>
<artifactId>gae-runtime</artifactId>
<version>${gae.version}</version>
<type>pom</type>
</dependency>
</dependencies>
</plugin>
<!-- Upload application to the appspot automatically, during release:perform -->
<plugin>
<artifactId>maven-release-plugin</artifactId>
<configuration>
<goals>gae:deploy</goals>
</configuration>
</plugin>
<!-- Java compiler version -->
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-compiler-plugin</artifactId>
<version>2.0</version>
<configuration>
<source>1.6</source>
<target>1.6</target>
</configuration>
</plugin>
<plugin>
<groupId>org.apache.maven.plugins</groupId>
<artifactId>maven-surefire-plugin</artifactId>
<version>2.5</version>
<configuration>
<excludes>
<exclude>com/***/integration/**/*Test.java</exclude>
</excludes>
</configuration>
</plugin>
</plugins>
</build>
<profiles>
<!-- We can configure our integration server to activate this profile and
perform gae:deploy, thus uploading latest snapshot to the http://1.latest.<applicationName>.appspot.com
automatically -->
<profile>
<id>integration-build</id>
<properties>
<gae.application.version>stage</gae.application.version>
</properties>
</profile>
<!-- This profile will activate automatically during release and upload
application to the http://2.latest.<applicationName>.appspot.com (We might
want to set the 2nd version as our applications Default version to be accessible
at http://<applicationName>.appspot.com) -->
<profile>
<id>release-build</id>
<activation>
<property>
<name>performRelease</name>
<value>true</value>
</property>
</activation>
<properties>
<!-- During release, set application version in appengine-web.xml to
2 -->
<gae.application.version>release</gae.application.version>
</properties>
</profile>
</profiles>
And this is what I get when running mvn gae:run:
WARNING: Nested in org.springframework.beans.factory.BeanCreationException: Error creating bean with name 'entityManagerFactory' defined in ServletContext resource [/WEB-INF/***-services.xml]: Instantiation of bean failed; nested exception is org.springframework.beans.factory.BeanDefinitionStoreException: Factory method [public static javax.persistence.EntityManagerFactory javax.persistence.Persistence.createEntityManagerFactory(java.lang.String)] threw exception; nested exception is java.lang.NoClassDefFoundError: org/datanucleus/OMFContext:
java.lang.ClassNotFoundException: org.datanucleus.OMFContext
at java.net.URLClassLoader$1.run(URLClassLoader.java:217)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
at com.google.appengine.tools.development.IsolatedAppClassLoader.loadClass(IsolatedAppClassLoader.java:176)
at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
at org.datanucleus.jpa.EntityManagerFactoryImpl.<init>(EntityManagerFactoryImpl.java:293)
at org.datanucleus.store.appengine.jpa.DatastoreEntityManagerFactory.<init>(DatastoreEntityManagerFactory.java:63)
at org.datanucleus.store.appengine.jpa.DatastorePersistenceProvider.createEntityManagerFactory(DatastorePersistenceProvider.java:35)
at javax.persistence.Persistence.createEntityManagerFactory(Persistence.java:150)
at javax.persistence.Persistence.createEntityManagerFactory(Persistence.java:70)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:616)
at com.google.appengine.tools.development.agent.runtime.Runtime.invoke(Runtime.java:104)
at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:145)
at org.springframework.beans.factory.support.ConstructorResolver$3.run(ConstructorResolver.java:564)
at java.security.AccessController.doPrivileged(Native Method)
at org.springframework.beans.factory.support.ConstructorResolver.instantiateUsingFactoryMethod(ConstructorResolver.java:562)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateUsingFactoryMethod(AbstractAutowireCapableBeanFactory.java:983)
at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:879)
[...]
Jan 17, 2012 11:24:55 PM com.google.apphosting.utils.jetty.JettyLogger info
INFO: Started SelectChannelConnector#0.0.0.0:8888
Jan 17, 2012 11:24:55 PM com.google.appengine.tools.development.DevAppServerImpl start
INFO: The server is running at http://localhost:8888/
Jan 17, 2012 11:24:55 PM com.google.appengine.tools.development.DevAppServerImpl start
INFO: The admin console is running at http://localhost:8888/_ah/admin
I changed the version of datanucleus-core so that OMFContent could be found but then it fails even more badly.
Any idea how to solve this?

GAE v1.0.10 needs DataNucleus v1.1.x
GAE v2.x needs DataNucleus 3.x